Pavir.Ga00626 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Ga00626 T202995_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ga00626.1.p GRAS 165 534

Links

Other GRAS family TFs
Other Panicum virgatum TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R006754 Calypte anna Aan_R006754 I 0.000
Afo_R004114 Aptenodytes forsteri Afo_R004114 I 0.000
SATB1 Anolis carolinensis ENSACAG00000007941 I 0.000
SATB2 Anolis carolinensis ENSACAG00000009821 I 0.000
ENSAMEG00000005350 Ailuropoda melanoleuca ENSAMEG00000005350 I 0.000
ENSAMXG00000002186 Astyanax mexicanus ENSAMXG00000002186 I 0.000
ENSAMXG00000015155 Astyanax mexicanus ENSAMXG00000015155 I 0.000
ENSAPLG00000008131 Anas platyrhynchos ENSAPLG00000008131 I 0.000
SATB2 Bos taurus ENSBTAG00000016334 I 0.000
SATB1 Bos taurus ENSBTAG00000021158 I 0.000
SATB2 Canis familiaris ENSCAFG00000010971 I 0.000
SATB1 Choloepus hoffmanni ENSCHOG00000002142 I 0.000
SATB2 Choloepus hoffmanni ENSCHOG00000012005 I 0.000
SATB2 Callithrix jacchus ENSCJAG00000004111 I 0.000
SATB1 Cavia porcellus ENSCPOG00000007101 I 0.000
SATB2 Cavia porcellus ENSCPOG00000015198 I 0.000
ENSCSAG00000011380 Chlorocebus sabaeus ENSCSAG00000011380 I 0.000
satb2 Danio rerio ENSDARG00000061885 I 0.000
SATB2 Dasypus novemcinctus ENSDNOG00000001292 I 0.000
SATB2 Equus caballus ENSECAG00000010043 I 0.000
SATB1 Equus caballus ENSECAG00000023585 I 0.000
SATB1 Erinaceus europaeus ENSEEUG00000010435 I 0.000
ENSFALG00000004242 Ficedula albicollis ENSFALG00000004242 I 0.000
SATB2 Felis catus ENSFCAG00000015781 I 0.000
SATB2 Homo sapiens ENSG00000119042 I 0.000
SATB2 Gasterosteus aculeatus ENSGACG00000009037 I 0.000
satb1b Gasterosteus aculeatus ENSGACG00000013013 I 0.000
SATB2 Gallus gallus ENSGALG00000008135 I 0.000
SATB2 Gorilla gorilla ENSGGOG00000014123 I 0.000
ENSGMOG00000006865 Gadus morhua ENSGMOG00000006865 I 0.000
ENSGMOG00000013657 Gadus morhua ENSGMOG00000013657 I 0.000
ENSLACG00000017798 Latimeria chalumnae ENSLACG00000017798 I 0.000
SATB2 Loxodonta africana ENSLAFG00000002924 I 0.000
ENSLOCG00000004032 Lepisosteus oculatus ENSLOCG00000004032 I 0.000
ENSLOCG00000006524 Lepisosteus oculatus ENSLOCG00000006524 I 0.000
SATB2 Meleagris gallopavo ENSMGAG00000007173 I 0.000
SATB2 Microcebus murinus ENSMICG00000009378 I 0.000
SATB2 Myotis lucifugus ENSMLUG00000001554 I 0.000
SATB1 Myotis lucifugus ENSMLUG00000001860 I 0.000
SATB2 Monodelphis domestica ENSMODG00000012352 I 0.000
SATB1 Monodelphis domestica ENSMODG00000014765 I 0.000
ENSMPUG00000007972 Mustela putorius furo ENSMPUG00000007972 I 0.000
Satb2 Mus musculus ENSMUSG00000038331 I 0.000
ENSNLEG00000006893 Nomascus leucogenys ENSNLEG00000006893 I 0.000
ENSOARG00000015604 Ovis aries ENSOARG00000015604 I 0.000
ENSOARG00000015783 Ovis aries ENSOARG00000015783 I 0.000
SATB2 Oryctolagus cuniculus ENSOCUG00000009700 I 0.000
SATB2 Otolemur garnettii ENSOGAG00000006949 I 0.000
ENSONIG00000008688 Oreochromis niloticus ENSONIG00000008688 I 0.000
ENSONIG00000013780 Oreochromis niloticus ENSONIG00000013780 I 0.000
ENSONIG00000015271 Oreochromis niloticus ENSONIG00000015271 I 0.000
SATB2 Ochotona princeps ENSOPRG00000003979 I 0.000
ENSP00000333367 Macaca fascicularis ENSP00000333367 I 0.000
ENSP00000401112-D1 Bos grunniens ENSP00000401112-D1 I 0.000
ENSP00000405420 Macaca fascicularis ENSP00000405420 I 0.000
ENSPANG00000011212 Papio anubis ENSPANG00000011212 I 0.000
SATB2 Procavia capensis ENSPCAG00000012822 I 0.000
ENSPFOG00000000642 Poecilia formosa ENSPFOG00000000642 I 0.000
ENSPFOG00000003900 Poecilia formosa ENSPFOG00000003900 I 0.000
ENSPFOG00000005488 Poecilia formosa ENSPFOG00000005488 I 0.000
ENSPPYG00000013052 Pongo abelii ENSPPYG00000013052 I 0.000
ENSPSIG00000018044 Pelodiscus sinensis ENSPSIG00000018044 I 0.000
SATB2 Pan troglodytes ENSPTRG00000012779 I 0.000
SATB2 Pteropus vampyrus ENSPVAG00000012029 I 0.000
Satb2 Rattus norvegicus ENSRNOG00000010188 I 0.000
SATB2 Sorex araneus ENSSARG00000014343 I 0.000
ENSSHAG00000011077 Sarcophilus harrisii ENSSHAG00000011077 I 0.000
ENSSHAG00000015368 Sarcophilus harrisii ENSSHAG00000015368 I 0.000
SATB1 Sus scrofa ENSSSCG00000011201 I 0.000
SATB2 Taeniopygia guttata ENSTGUG00000010480 I 0.000
SATB2 Tetraodon nigroviridis ENSTNIG00000005271 I 0.000
satb1b Tetraodon nigroviridis ENSTNIG00000011663 I 0.000
satb2 Tetraodon nigroviridis ENSTNIG00000014467 I 0.000
satb2 Takifugu rubripes ENSTRUG00000005073 I 0.000
SATB2 Takifugu rubripes ENSTRUG00000015384 I 0.000
ENSXMAG00000004215 Xiphophorus maculatus ENSXMAG00000004215 I 0.000
ENSXMAG00000007412 Xiphophorus maculatus ENSXMAG00000007412 I 0.000
ENSXMAG00000018662 Xiphophorus maculatus ENSXMAG00000018662 I 0.000
Gfo_R001489 Geospiza fortis Gfo_R001489 I 0.000
Myotis_brandtii_Satb1_10034564 Myotis brandtii Myotis_brandtii_Satb1_10034564 I 0.000
Myotis_brandtii_Satb2_10019975 Myotis brandtii Myotis_brandtii_Satb2_10019975 I 0.000
Ogr08679 Ophisaurus gracilis Ogr08679 I 0.000
Pvit_10645 Pogona vitticeps Pvit_10645 I 0.000
Pvit_16605 Pogona vitticeps Pvit_16605 I 0.000
Tal_R006309 Tyto alba Tal_R006309 I 0.000
satb2 Xenopus tropicalis XB-GENE-5822252 I 0.000
satb1 Xenopus tropicalis XB-GENE-854103 I 0.000