CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ib02102
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.Ib02102
T203032_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ib02102.1.p
GRAS
185
544
AVDQLAEAAKLAEAGDAFGAREILARLNYRLPAVPAAGTPLLRSAFYFKEALRLALSPTGEAPAPQVSTPYDVVLKLGAYKAFSEVSPVLQFAHLTCVQAVLDEIGGAGRIHVLDFDIGMGEQWASLMQELAQRCPAATLKVTALVSSATHHPLELQLIHENLAGFAAELGVFLQFAVFNLDTLDPAELVAITSGDAVAVHLPVGSAHVAAMPAVLRLVKRLGAKVVVSVDHGGDRTELPFAAHLFQAFQSCVSLLESVDAVRPDADAVAKMERFLVQPGVERRVVARHRAAAMDKPPPPWRTVFAAAGFVPVQASTFAESQAEALLKRMALMGFRVEKRGGALCLYWQRGELVSVSAWR
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CG32767
Drosophila melanogaster
FBgn0052767
N
GG18508
Drosophila erecta
FBgn0110721
N
GH24275
Drosophila grimshawi
FBgn0131731
N
GI21583
Drosophila mojavensis
FBgn0144313
N
GL26812
Drosophila persimilis
FBgn0164393
N
GM12656
Drosophila sechellia
FBgn0167592
N
GJ15805
Drosophila virilis
FBgn0202992
N
GK25297
Drosophila willistoni
FBgn0227256
N
GE16826
Drosophila yakuba
FBgn0234318
N
LCUP003803
Lucilia cuprina
LCUP003803
N