CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J25515
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.J25515
T203077_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J25515.1.p
GRAS
31
418
PRGLVLACAGLLHRGDVDGARRAAAEVLSTADPRGDAADRLAHHFGRALARRVDGGDDVAAAVPAGAAGAASSSSSAPGAPSATAYLAYNQIAPFLRFAHLTANQAILDAAAAAGGGGGGARRLHIVDLDAAHGVQWPPLLQAIADRADPDLGPPEVRITGAGPDRDVLLRTGDRLRAFAGSLNLPFRFHPLLLPRTTQLTVADPATELELHPDETLAVNCVLFLHKLGSDGEVAAFLNWVKSMNPSVVTLAEREASIGGGDCPEDLHRRVATAMDYYSAVFDALEATAPPGSADRLAVEQEVLGQEIDAVVAPGGHAGRRARGFESWAAAARAAGLSPRPLSAFAVSQARLLLRLYYPSEGYVAEEARGACFLGWQTRPLMSVSSWQ
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CG15514
Drosophila melanogaster
FBgn0039712
N
GA13775
Drosophila pseudoobscura
FBgn0073811
N
GF16227
Drosophila ananassae
FBgn0093249
N
GH13994
Drosophila grimshawi
FBgn0121470
N
GI22339
Drosophila mojavensis
FBgn0145067
N
GL13476
Drosophila persimilis
FBgn0151082
N
GM12210
Drosophila sechellia
FBgn0167147
N
GD17609
Drosophila simulans
FBgn0189159
N
GJ10526
Drosophila virilis
FBgn0197806
N
GK13378
Drosophila willistoni
FBgn0215387
N
GE10417
Drosophila yakuba
FBgn0228281
N