CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10010179m.g
(
Eutrema salsugineum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Thhalv10010179m.g
T203197_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10010179m
GRAS
293
653
LLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLNSCLGIYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEESVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGTSMEALQATGKRLSDFADKLGLPFEFCPLAEKVGNLDAERLNVRKREAVAVHWLQHSLYDVTGSDTHTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVLAVGGPSRSGEVKFESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYTLVDDNGTLKLGWKDLSLLTASAWT
Links
Other
GRAS
family TFs
Other
Eutrema salsugineum
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R005866
Calypte anna
Aan_R005866
I
0.000
Cmyd_10009744
Chelonia mydas
Cmyd_10009744
I
0.000
LIN28B
Anolis carolinensis
ENSACAG00000003957
I
0.000
ENSFALG00000000374
Ficedula albicollis
ENSFALG00000000374
I
0.000
ENSGALG00000000388
Gallus gallus
ENSGALG00000000388
I
0.000
ENSLACG00000004053
Latimeria chalumnae
ENSLACG00000004053
I
0.000
LIN28A
Meleagris gallopavo
ENSMGAG00000009456
I
0.000