CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjSGA_032523.1
(
Lotus japonicus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
LjSGA_032523.1
T203305_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjSGA_032523.1
GRAS
181
453
LKQLLIVSAKALSENKMKDFDHLIGKARSCVSISGEPIQRLGAYLVEGLVARKEASGNNIYHALRCREPEGKDLLSYMQLLYDMCPYLKFGYMAANGAIAEACRNEDQIHIIDFQICQGTQWTTLLQALGARPGGAPHVRITGIDDPVSRYARGDGLEVVAKRLALISEKFSIPVEFHGVPVFSPNVTRDMLDVRPGEALAVNFPLQLHHTADEMLMXYPRRILRWXILLQVSLGDRSELTLVEQESNTNTTPFFNRFVETLDYYLGMFESLD
Links
Other
GRAS
family TFs
Other
Lotus japonicus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA029005
Oryza indica
BGIOSGA029005
N
F775_04514
Aegilops tauschii
F775_04514
N
LPERR08G17300
Leersia perrieri
LPERR08G17300
N
OB08G27360
Oryza brachyantha
OB08G27360
N
OBART08G20460
Oryza barthii
OBART08G20460
N
OGLUM08G21760
Oryza glumaepatula
OGLUM08G21760
N
OMERI02G02130
Oryza meridionalis
OMERI02G02130
N
ONIVA08G23410
Oryza nivara
ONIVA08G23410
N
OPUNC08G18660
Oryza punctata
OPUNC08G18660
N
ORUFI08G22960
Oryza rufipogon
ORUFI08G22960
N
Pavir.Cb01140
Panicum virgatum
Pavir.Cb01140
N
Pavir.Fb01953
Panicum virgatum
Pavir.Fb01953
N
Pavir.J04242
Panicum virgatum
Pavir.J04242
N
Sb07g026800
Sorghum bicolor
Sb07g026800
N
Si015521m.g
Setaria italica
Si015521m.g
N
Traes_5BL_26B26165E
Triticum aestivum
Traes_5BL_26B26165E
N
TRIUR3_34186
Triticum urartu
TRIUR3_34186
N