ACEP20447 (Atta cephalotes)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ACEP20447 T204067_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.792 0.522
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.792 0.522
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.792 0.522
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.792 0.522
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.792 0.522
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.792 0.522
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.792 0.522
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.792 0.522
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.792 0.522
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.714 0.391
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.714 0.391
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.714 0.391
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACEP20447-PA Homeodomain 22 67

Links

Other Homeodomain family TFs
Other Atta cephalotes TFs

1242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30131.m007078 Ricinus communis 30131.m007078 I 0.000
30138.m003866 Ricinus communis 30138.m003866 I 0.000
AC186606.4_FG003 Zea mays AC186606.4_FG003 I 0.000
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.000
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.000
BGIOSGA008968 Oryza indica BGIOSGA008968 I 0.000
BGIOSGA026766 Oryza indica BGIOSGA026766 I 0.000
BGIOSGA029595 Oryza indica BGIOSGA029595 I 0.000
Bo9g163740 Brassica oleracea Bo9g163740 I 0.000
Bra008670 Brassica rapa Bra008670 I 0.000
BRADI3G56290 Brachypodium distachyon BRADI3G56290 I 0.000
BRADI4G32920 Brachypodium distachyon BRADI4G32920 I 0.000
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.000
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.000
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.000
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.000
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.000
Ca_17416 Cicer arietinum Ca_17416 I 0.000
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.000
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.000
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.000
Cla005975 Citrullus lanatus Cla005975 I 0.000
Cla016748 Citrullus lanatus Cla016748 I 0.000
Cla016841 Citrullus lanatus Cla016841 I 0.000
Cla020641 Citrullus lanatus Cla020641 I 0.000
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.000
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.000
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.000
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.000
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.000
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.000
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.000
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.000
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.000
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.000
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.000
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.000
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.000
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.000
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.000
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.000
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.000
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.000
GRMZM2G020799 Zea mays GRMZM2G020799 I 0.000
GRMZM2G122846 Zea mays GRMZM2G122846 I 0.000
GRMZM2G144480 Zea mays GRMZM2G144480 I 0.000
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.000
GSMUA_Achr5G05350_001 Musa acuminata GSMUA_Achr5G05350_001 I 0.000
GSMUA_Achr6G36230_001 Musa acuminata GSMUA_Achr6G36230_001 I 0.000
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I 0.000
GSMUA_Achr9G14690_001 Musa acuminata GSMUA_Achr9G14690_001 I 0.000
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I 0.000
LPERR08G15570 Leersia perrieri LPERR08G15570 I 0.000
LPERR09G10020 Leersia perrieri LPERR09G10020 I 0.000
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.000
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.000
MDP0000183562 Malus domestica MDP0000183562 I 0.000
MDP0000205823 Malus domestica MDP0000205823 I 0.000
MDP0000738631 Malus domestica MDP0000738631 I 0.000
MDP0000863909 Malus domestica MDP0000863909 I 0.000
MDP0000891108 Malus domestica MDP0000891108 I 0.000
mgf017392m Mimulus guttatus mgf017392m I 0.000
MLOC_62430 Hordeum vulgare MLOC_62430 I 0.000
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.000
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.000
OB09G20300 Oryza brachyantha OB09G20300 I 0.000
OBART02G31030 Oryza barthii OBART02G31030 I 0.000
OBART08G18720 Oryza barthii OBART08G18720 I 0.000
OBART09G13750 Oryza barthii OBART09G13750 I 0.000
OBART09G13760 Oryza barthii OBART09G13760 I 0.000
OGLUM02G31690 Oryza glumaepatula OGLUM02G31690 I 0.000
OGLUM08G19690 Oryza glumaepatula OGLUM08G19690 I 0.000
OGLUM09G14340 Oryza glumaepatula OGLUM09G14340 I 0.000
OLONG_004835 Oryza longistaminata OLONG_004835 I 0.000
OLONG_013604 Oryza longistaminata OLONG_013604 I 0.000
OMERI08G14760 Oryza meridionalis OMERI08G14760 I 0.000
ONIVA02G34180 Oryza nivara ONIVA02G34180 I 0.000
ONIVA08G20730 Oryza nivara ONIVA08G20730 I 0.000
ONIVA09G14270 Oryza nivara ONIVA09G14270 I 0.000
OPUNC02G28720 Oryza punctata OPUNC02G28720 I 0.000
OPUNC08G16670 Oryza punctata OPUNC08G16670 I 0.000
OPUNC09G12140 Oryza punctata OPUNC09G12140 I 0.000
OPUNC09G12240 Oryza punctata OPUNC09G12240 I 0.000
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.000
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.000
ORGLA02G0265300 Oryza glaberrima ORGLA02G0265300 I 0.000
ORGLA08G0162900 Oryza glaberrima ORGLA08G0162900 I 0.000
ORGLA09G0104900 Oryza glaberrima ORGLA09G0104900 I 0.000
ORUFI02G32700 Oryza rufipogon ORUFI02G32700 I 0.000
ORUFI08G08020 Oryza rufipogon ORUFI08G08020 I 0.000
ORUFI09G14730 Oryza rufipogon ORUFI09G14730 I 0.000
OS02G0728001 Oryza sativa OS02G0728001 D 0.000
OS08G0487100 Oryza sativa OS08G0487100 I 0.000
OS09G0474000 Oryza sativa OS09G0474000 I 0.000
Pavir.Ba01782 Panicum virgatum Pavir.Ba01782 I 0.000
Pavir.Bb02514 Panicum virgatum Pavir.Bb02514 I 0.000
Pavir.Fa00602 Panicum virgatum Pavir.Fa00602 I 0.000
Pavir.Fb01824 Panicum virgatum Pavir.Fb01824 I 0.000
PGSC0003DMG400007523 Solanum tuberosum PGSC0003DMG400007523 I 0.000
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.000
PK07533.1 Cannabis sativa PK07533.1 I 0.000
Pm002353 Prunus mume Pm002353 I 0.000
Pm015434 Prunus mume Pm015434 I 0.000
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.000
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.000
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.000
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.000
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.000
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.000
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.000
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.000
Sb02g027410 Sorghum bicolor Sb02g027410 I 0.000
Sb07g028900 Sorghum bicolor Sb07g028900 I 0.000
Sb07g028960 Sorghum bicolor Sb07g028960 I 0.000
Si014433m.g Setaria italica Si014433m.g I 0.000
Si019897m.g Setaria italica Si019897m.g I 0.000
Si031238m.g Setaria italica Si031238m.g I 0.000
TCM_000835 Theobroma cacao TCM_000835 I 0.000
Traes_5BL_C559EFC8A Triticum aestivum Traes_5BL_C559EFC8A I 0.000
Traes_5DL_591F8EFBD Triticum aestivum Traes_5DL_591F8EFBD I 0.000
Traes_6AL_E0ED0DE45 Triticum aestivum Traes_6AL_E0ED0DE45 I 0.000
Traes_6DL_77ACE1279 Triticum aestivum Traes_6DL_77ACE1279 I 0.000
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.000
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.000