AMTR_s00029p00225270 (Amborella trichopoda)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 AMTR_s00029p00225270 T204386_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WUS
M06905_2.00 		Arabidopsis thaliana
TRAWTGAWTGA
TCAWTCAWTYA		 Dap-seq
OMalley et al.(2016)
WUS1_col_a 		0.682 0.649
WUS
M06906_2.00 		Arabidopsis thaliana
TGAWTGAWTGW
WCAWTCAWTCA		 Dap-seq
OMalley et al.(2016)
WUS1_colamp_a 		0.682 0.649
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN09718 Homeodomain 15 76

Links

Other Homeodomain family TFs
Other Amborella trichopoda TFs

437 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Da01739 Panicum virgatum Pavir.Da01739 N 0.000
Pavir.J36570 Panicum virgatum Pavir.J36570 N 0.000
Sb10g002680 Sorghum bicolor Sb10g002680 N 0.000
Traes_4BL_9A17EA3B7 Triticum aestivum Traes_4BL_9A17EA3B7 I 0.000