BGIOSGA013638 (Oryza indica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 BGIOSGA013638 T204711_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.694 0.500
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.690 0.521
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.690 0.521
HOS66
M02156_2.00 		Oryza sativa
NNNNDHNN
NNDHNNNN		 PBM
Weirauch et al.(2014)
pTH8332 		0.677 0.500
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.641 0.438
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.605 0.417
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.605 0.417
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.605 0.417
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.605 0.417
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.601 0.438
PK25034.1
M01254_2.00 		Cannabis sativa
NNTGACRKBN
NVMYGTCANN		 PBM
Lambert et al.(2019)
pTH11259 		0.599 0.646
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA013638-PA Homeodomain 254 301

Links

Other Homeodomain family TFs
Other Oryza indica TFs

1225 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O5_02185 Cladophialophora psammophila A1O5_02185 N
A1O7_07617 Cladophialophora yegresii A1O7_07617 N
A1O9_02587 Exophiala aquamarina A1O9_02587 N
BDDG_02980 Blastomyces dermatitidis BDDG_02980 N
ACLA_021680 Aspergillus clavatus CADACLAG00003021 N
AFUA_1G13750 Aspergillus fumigatus CADAFUAG00007079 N
CADANGAG00007007 Aspergillus niger CADANGAG00007007 N
NFIA_011750 Neosartorya fischeri CADNFIAG00000778 N
CIMG_03383 Coccidioides immitis CIMG_03383 N
CPC735_008270 Coccidioides posadasii CPC735_008270 N
EPUS_00094 Endocarpon pusillum EPUS_00094 N
fgenesh1_pg.00083_#_396 Aspergillus carbonarius fgenesh1_pg.00083_#_396 N
G647_02466 Cladophialophora carrionii G647_02466 N
HCBG_03883 Histoplasma capsulatum HCBG_03883 N
HMPREF1541_03127 Cyphellophora europaea HMPREF1541_03127 N
OIDMADRAFT_81970 Oidiodendron maius OIDMADRAFT_81970 N
PAAG_12332 Paracoccidioides sp lutzii PAAG_12332 N
PABG_02440 Paracoccidioides brasiliensis PABG_02440 N
PDE_00230 Penicillium oxalicum PDE_00230 N
PMAA_067070 Talaromyces marneffei PMAA_067070 N
PMAA_067070 Penicillium marneffei PMAA_067070 N
PV04_08090 Capronia semiimmersa PV04_08090 N
PV05_09041 Exophiala xenobiotica PV05_09041 N
PV06_02231 Exophiala oligosperma PV06_02231 N
PV07_11807 Cladophialophora immunda PV07_11807 N
PV08_11535 Exophiala spinifera PV08_11535 N
PV10_02629 Exophiala mesophila PV10_02629 N
PV11_07301 Exophiala sideris PV11_07301 N
PVAR5_5233 Byssochlamys spectabilis PVAR5_5233 N
SBOR_9986 Sclerotinia borealis SBOR_9986 N
TSTA_087090 Talaromyces stipitatus TSTA_087090 N
Z517_03216 Fonsecaea pedrosoi Z517_03216 N
Z518_06914 Rhinocladiella mackenziei Z518_06914 N
Z519_01293 Cladophialophora bantiana Z519_01293 N