CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo1g014710
(
Brassica oleracea
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
Bo1g014710
T204852_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MTR_2g038000
M02141_2.00
Medicago truncatula
NDNYWNNNNN
NNNNNWRNHN
PBM
Weirauch et al.(2014)
pTH6339
0.705
0.714
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo1g014710.1
Homeodomain
449
504
KRRMFRIPRAAVEKLRQVFVENELPSKAVRDSLSKELSLDPEKVSKWFKNARYMAL
Links
Other
Homeodomain
family TFs
Other
Brassica oleracea
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BN7_5384
Wickerhamomyces ciferrii
BN7_5384
N
0.000
HPODL_04599
Ogataea parapolymorpha
HPODL_04599
N
0.000
JL09_g4930
Pichia kudriavzevii
JL09_g4930
N
0.000
KLLA0_A01804g
Kluyveromyces lactis
KLLA0_A01804g
N
0.000
KUCA_T00003267001
Kuraishia capsulata
KUCA_T00003267001
N
0.000