Bra011153 (Brassica rapa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Bra011153 T205076_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MTR_2g038000
M02141_2.00 		Medicago truncatula
NDNYWNNNNN
NNNNNWRNHN		 PBM
Weirauch et al.(2014)
pTH6339 		0.714 0.732
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra011153.1-P Homeodomain 451 506

Links

Other Homeodomain family TFs
Other Brassica rapa TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAH70718 Xenopus laevis AAH70718 I 0.000
Aan_R007004 Calypte anna Aan_R007004 I 0.000
Afo_R000236 Aptenodytes forsteri Afo_R000236 I 0.000
Brh_R000160 Buceros rhinoceros Brh_R000160 I 0.000
Cmyd_10016351 Chelonia mydas Cmyd_10016351 I 0.000
ZBTB18 Anolis carolinensis ENSACAG00000004296 I 0.000
ENSAMEG00000019750 Ailuropoda melanoleuca ENSAMEG00000019750 I 0.000
ENSAMXG00000002993 Astyanax mexicanus ENSAMXG00000002993 I 0.000
ENSAPLG00000002367 Anas platyrhynchos ENSAPLG00000002367 I 0.000
ZBTB18 Bos taurus ENSBTAG00000000385 I 0.000
ENSBTAP00000000497-D1 Bos grunniens ENSBTAP00000000497-D1 I 0.000
ZBTB18 Callithrix jacchus ENSCJAG00000017087 I 0.000
ENSCPOG00000023254 Cavia porcellus ENSCPOG00000023254 I 0.000
zbtb18 Danio rerio ENSDARG00000028228 I 0.000
ZBTB18 Dasypus novemcinctus ENSDNOG00000009334 I 0.000
ENSDORG00000000569 Dipodomys ordii ENSDORG00000000569 I 0.000
ZBTB18 Equus caballus ENSECAG00000018829 I 0.000
ZBTB18 Erinaceus europaeus ENSEEUG00000014181 I 0.000
ENSFALG00000011473 Ficedula albicollis ENSFALG00000011473 I 0.000
ENSFCAG00000026731 Felis catus ENSFCAG00000026731 I 0.000
ZBTB18 Homo sapiens ENSG00000179456 D 0.000
zbtb18 Gasterosteus aculeatus ENSGACG00000010518 I 0.000
ZBTB18 Gallus gallus ENSGALG00000010705 I 0.000
ZBTB18 Gorilla gorilla ENSGGOG00000028442 I 0.000
ENSGMOG00000018718 Gadus morhua ENSGMOG00000018718 I 0.000
ENSLACG00000009889 Latimeria chalumnae ENSLACG00000009889 I 0.000
ZBTB18 Loxodonta africana ENSLAFG00000002879 I 0.000
ENSLOCG00000017349 Lepisosteus oculatus ENSLOCG00000017349 I 0.000
ENSMEUG00000009369 Macropus eugenii ENSMEUG00000009369 I 0.000
ZBTB18 Meleagris gallopavo ENSMGAG00000011476 I 0.000
ZBTB18 Microcebus murinus ENSMICG00000007600 I 0.000
ZBTB18 Myotis lucifugus ENSMLUG00000011285 I 0.000
ZBTB18 Macaca mulatta ENSMMUG00000015664 I 0.000
ZBTB18 Monodelphis domestica ENSMODG00000006570 I 0.000
ENSMPUG00000015734 Mustela putorius furo ENSMPUG00000015734 I 0.000
Zbtb18 Mus musculus ENSMUSG00000063659 I 0.000
ENSNLEG00000003981 Nomascus leucogenys ENSNLEG00000003981 I 0.000
ZBTB18 Ornithorhynchus anatinus ENSOANG00000010257 I 0.000
ZBTB18 Oryctolagus cuniculus ENSOCUG00000007968 I 0.000
ZBTB18 Otolemur garnettii ENSOGAG00000013580 I 0.000
ENSONIG00000000862 Oreochromis niloticus ENSONIG00000000862 I 0.000
zbtb18 Oryzias latipes ENSORLG00000004823 I 0.000
ENSP00000351539 Macaca fascicularis ENSP00000351539 I 0.000
ENSPANG00000021934 Papio anubis ENSPANG00000021934 I 0.000
ENSPFOG00000022080 Poecilia formosa ENSPFOG00000022080 I 0.000
ENSPPYG00000000059 Pongo abelii ENSPPYG00000000059 I 0.000
ZBTB18 Pan troglodytes ENSPTRG00000002175 I 0.000
ZBTB18 Pteropus vampyrus ENSPVAG00000011441 I 0.000
Zfp238 Rattus norvegicus ENSRNOG00000004423 I 0.000
ZBTB18 Sorex araneus ENSSARG00000002984 I 0.000
ENSSHAG00000008659 Sarcophilus harrisii ENSSHAG00000008659 I 0.000
ENSSSCG00000030070 Sus scrofa ENSSSCG00000030070 I 0.000
ENSSTOG00000004290 Ictidomys tridecemlineatus ENSSTOG00000004290 I 0.000
ZBTB18 Taeniopygia guttata ENSTGUG00000008247 I 0.000
zbtb18 Tetraodon nigroviridis ENSTNIG00000000430 I 0.000
zbtb18 Takifugu rubripes ENSTRUG00000000952 I 0.000
ENSTSYG00000004607 Tarsius syrichta ENSTSYG00000004607 I 0.000
ZBTB18 Tursiops truncatus ENSTTRG00000000615 I 0.000
ENSXMAG00000018241 Xiphophorus maculatus ENSXMAG00000018241 I 0.000
Gfo_R011040 Geospiza fortis Gfo_R011040 I 0.000
Myotis_brandtii_ZNF238_10003031 Myotis brandtii Myotis_brandtii_ZNF238_10003031 I 0.000
Pvit_01078 Pogona vitticeps Pvit_01078 I 0.000
zbtb18 Xenopus tropicalis XB-GENE-1003542 I 0.000
zbtb18.L Xenopus laevis XB-GENE-1003548 I 0.000
znf238.2.L Xenopus laevis XB-GENE-1219070 I 0.000