CBG05292 (Caenorhabditis briggsae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CBG05292 T205525_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pbx3
M09205_2.00 		Mus musculus
BBBTGATTGRYNDN
NHNRYCAATCAVVV		 Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A 		0.685 0.719
Pbx1
M00513_2.00 		Mus musculus
NNDKANNNN
NNNNTMHNN		 PBM
Berger et al.(2008)
Pbx1_3203 		0.685 0.702
PBX1
M05362_2.00 		Homo sapiens
NTGATKGAYR
YRTCMATCAN		 SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX 		0.685 0.702
PBX1
M05364_2.00 		Homo sapiens
DTGMTKGRYN
NRYCMAKCAH		 SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX 		0.685 0.702
PBX1
M02685_2.00 		Homo sapiens
WWTGATTGATND
HNATCAATCAWW		 SELEX
Mathelier et al.(2014)
MA0070.1 		0.685 0.702
PBX2
M08134_2.00 		Homo sapiens
NWGAKTGACABN
NVTGTCAMTCWN		 ChIP-seq
Mathelier et al.(2014)
MA1113.1 		0.685 0.702
PBX1
M09164_2.00 		Homo sapiens
DGABTGRCRG
CYGYCAVTCH		 Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A 		0.685 0.702
PBX2
M09165_2.00 		Homo sapiens
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C 		0.685 0.702
Pbx2
M09199_2.00 		Mus musculus
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C 		0.685 0.702
PBX1
M09561_2.00 		Homo sapiens
TGABTGACAGSC
GSCTGTCAVTCA		 Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007 		0.685 0.702
PBX1
M10748_2.00 		Homo sapiens
WTKATTRDT
AHYAATMAW		 Transfac
Matys et al.(2006)
V$PBX1_01 		0.685 0.702
PBX1
M10749_2.00 		Homo sapiens
DNHTTGATTGATKDB
VHMATCAATCAADNH		 Transfac
Matys et al.(2006)
V$PBX1_02 		0.685 0.702
PBX1
M10750_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_03 		0.685 0.702
PBX1
M10751_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_05 		0.685 0.702
PBX1
M10752_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_10 		0.685 0.702
PBX1
M10753_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_Q3 		0.685 0.702
PBX1
M05363_2.00 		Homo sapiens
DTGAKKGAYG
CRTCMMTCAH		 SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX 		0.685 0.702
PBX1
M05365_2.00 		Homo sapiens
MRTCAATCMH
DKGATTGAYK		 SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX 		0.685 0.702
pbx4
M02110_2.00 		Tetraodon nigroviridis
TTGAYGDV
BHCRTCAA		 PBM
Weirauch et al.(2014)
pTH6425 		0.685 0.684
exd
M06487_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Mathelier et al.(2014)
MA0222.1 		0.640 0.719
exd
M06243_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611 		0.640 0.719
exd
M06244_2.00 		Drosophila melanogaster
NWRNWYNAAA
TTTNRWNYWN		 B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611 		0.640 0.719
exd
M06245_2.00 		Drosophila melanogaster
NDTGAYRW
WYRTCAHN		 B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611 		0.640 0.719
exd
M06246_2.00 		Drosophila melanogaster
NNDTGAYR
YRTCAHNN		 B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611 		0.640 0.719
PBX4
M00277_2.00 		Homo sapiens
NNDDWHDNNN
NNNHDWHHNN		 PBM
Barrera et al.(2016)
PBX4_REF 		0.638 0.667
PBX4
M10649_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX4_01 		0.638 0.667
PBX4
M00276_2.00 		Homo sapiens
NYTAATTADNN
NNHTAATTARN		 PBM
Barrera et al.(2016)
PBX4_R215Q 		0.638 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG05292 Homeodomain 185 244

Links

Other Homeodomain family TFs
Other Caenorhabditis briggsae TFs

413 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003097 Aedes aegypti AAEL003097 N
AALB004109 Anopheles albimanus AALB004109 N
Aan_R005984 Calypte anna Aan_R005984 N
AARA007796 Anopheles arabiensis AARA007796 N
AATE013496 Anopheles atroparvus AATE013496 N
ACEP21389 Atta cephalotes ACEP21389 N
ACHR000042 Anopheles christyi ACHR000042 N
ACOM025306 Anopheles coluzzii ACOM025306 N
ACYPI47146 Acyrthosiphon pisum ACYPI47146 N
ADAC004139 Anopheles darlingi ADAC004139 N
Afo_R003276 Aptenodytes forsteri Afo_R003276 N
AGAP007133 Anopheles gambiae AGAP007133 N
Alligator_sinensis_CCG015084.1 Alligator sinensis Alligator_sinensis_CCG015084.1 N
AMEC009276 Anopheles melas AMEC009276 N
AMEM004763 Anopheles merus AMEM004763 N
AQUA002064 Anopheles quadriannulatus AQUA002064 N
CapteG124203 Capitella teleta CapteG124203 N
CGI_10022084 Crassostrea gigas CGI_10022084 N
DAPPUDRAFT_312030 Daphnia pulex DAPPUDRAFT_312030 N
ENSAMEG00000006258 Ailuropoda melanoleuca ENSAMEG00000006258 N
ENSAMXG00000020082 Astyanax mexicanus ENSAMXG00000020082 N
CAMTA2 Bos taurus ENSBTAG00000008591 N
ENSBTAP00000011330-D1 Bos grunniens ENSBTAP00000011330-D1 N
CAMTA2 Canis familiaris ENSCAFG00000015674 N
CAMTA1 Canis familiaris ENSCAFG00000019650 N
CAMTA2 Callithrix jacchus ENSCJAG00000011609 N
CAMTA2 Cavia porcellus ENSCPOG00000007319 N
CAMTA1 Cavia porcellus ENSCPOG00000014759 N
ENSCSAG00000012903 Chlorocebus sabaeus ENSCSAG00000012903 N
camta1a Danio rerio ENSDARG00000077428 N
CAMTA2 Dasypus novemcinctus ENSDNOG00000036357 N
Camta1 Dipodomys ordii ENSDORG00000003017 N
Camta2 Dipodomys ordii ENSDORG00000011763 N
CAMTA2 Equus caballus ENSECAG00000019370 N
ENSFALG00000009834 Ficedula albicollis ENSFALG00000009834 N
CAMTA2 Felis catus ENSFCAG00000008698 N
CAMTA2 Homo sapiens ENSG00000108509 N
CAMTA1 Homo sapiens ENSG00000171735 N
ENSGACG00000001106 Gasterosteus aculeatus ENSGACG00000001106 N
camta1b Gasterosteus aculeatus ENSGACG00000007914 N
CAMTA1 Gorilla gorilla ENSGGOG00000003577 N
CAMTA2 Gorilla gorilla ENSGGOG00000009188 N
ENSGMOG00000017650 Gadus morhua ENSGMOG00000017650 N
ENSGMOG00000019408 Gadus morhua ENSGMOG00000019408 N
ENSLACG00000014089 Latimeria chalumnae ENSLACG00000014089 N
ENSLACG00000014574 Latimeria chalumnae ENSLACG00000014574 N
CAMTA2 Loxodonta africana ENSLAFG00000012042 N
ENSLOCG00000013712 Lepisosteus oculatus ENSLOCG00000013712 N
ENSMEUG00000007952 Macropus eugenii ENSMEUG00000007952 N
CAMTA2 Microcebus murinus ENSMICG00000012537 N
CAMTA2 Myotis lucifugus ENSMLUG00000014019 N
CAMTA2 Macaca mulatta ENSMMUG00000009176 N
CAMTA2 Monodelphis domestica ENSMODG00000005219 N
ENSMPUG00000006733 Mustela putorius furo ENSMPUG00000006733 N
ENSMPUG00000011010 Mustela putorius furo ENSMPUG00000011010 N
Camta1 Mus musculus ENSMUSG00000014592 N
Camta2 Mus musculus ENSMUSG00000040712 N
ENSNLEG00000017452 Nomascus leucogenys ENSNLEG00000017452 N
ENSOANG00000030450 Ornithorhynchus anatinus ENSOANG00000030450 N
ENSOARG00000004897 Ovis aries ENSOARG00000004897 N
CAMTA2 Oryctolagus cuniculus ENSOCUG00000001109 N
CAMTA2 Otolemur garnettii ENSOGAG00000014734 N
ENSONIG00000004505 Oreochromis niloticus ENSONIG00000004505 N
ENSONIG00000019368 Oreochromis niloticus ENSONIG00000019368 N
CAMTA1 Ochotona princeps ENSOPRG00000015968 N
camta1b Oryzias latipes ENSORLG00000016337 N
ENSP00000306522-D1 Bos grunniens ENSP00000306522-D1 N
ENSP00000321813 Macaca fascicularis ENSP00000321813 N
ENSPANG00000024316 Papio anubis ENSPANG00000024316 N
ENSPFOG00000000859 Poecilia formosa ENSPFOG00000000859 N
ENSPFOG00000016244 Poecilia formosa ENSPFOG00000016244 N
ENSPPYG00000001932 Pongo abelii ENSPPYG00000001932 N
ENSPPYG00000007853 Pongo abelii ENSPPYG00000007853 N
ENSPSIG00000004616 Pelodiscus sinensis ENSPSIG00000004616 N
CAMTA1 Pan troglodytes ENSPTRG00000000096 N
CAMTA2 Pteropus vampyrus ENSPVAG00000003768 N
CAMTA1 Pteropus vampyrus ENSPVAG00000005390 N
Camta2 Rattus norvegicus ENSRNOG00000004283 N
Camta1 Rattus norvegicus ENSRNOG00000018602 N
CAMTA2 Sorex araneus ENSSARG00000004137 N
ENSSHAG00000006160 Sarcophilus harrisii ENSSHAG00000006160 N
CAMTA2 Sus scrofa ENSSSCG00000017902 N
ENSSTOG00000003897 Ictidomys tridecemlineatus ENSSTOG00000003897 N
ENSSTOG00000011183 Ictidomys tridecemlineatus ENSSTOG00000011183 N
CAMTA1 Taeniopygia guttata ENSTGUG00000002566 N
ENSTNIG00000001909 Tetraodon nigroviridis ENSTNIG00000001909 N
ENSTNIG00000003621 Tetraodon nigroviridis ENSTNIG00000003621 N
ENSTRUG00000000888 Takifugu rubripes ENSTRUG00000000888 N
camta1b Takifugu rubripes ENSTRUG00000010941 N
ENSTSYG00000007714 Tarsius syrichta ENSTSYG00000007714 N
CAMTA2 Tursiops truncatus ENSTTRG00000001303 N
ENSXMAG00000001955 Xiphophorus maculatus ENSXMAG00000001955 N
ENSXMAG00000018742 Xiphophorus maculatus ENSXMAG00000018742 N
e_gw.96.31.1 Branchiostoma floridae e_gw.96.31.1 N
GD10658 Drosophila simulans FBgn0182425 N
Camta Drosophila melanogaster FBgn0259234 N
GA30460 Drosophila pseudoobscura FBgn0264597 N
fgenesh2_pg.scaffold_96000095 Branchiostoma floridae fgenesh2_pg.scaffold_96000095 N
Gfo_R002636 Geospiza fortis Gfo_R002636 N
Hsal_08954--XP_001120489.1_APIME Harpegnathos saltator Hsal_08954--XP_001120489.1_APIME N
ISCW018640 Ixodes scapularis ISCW018640 N
LCUP001199 Lucilia cuprina LCUP001199 N
MDOA011429 Musca domestica MDOA011429 N
Myotis_brandtii_CAMTA2_10007480 Myotis brandtii Myotis_brandtii_CAMTA2_10007480 N
Ocbimv22002350m.g Octopus bimaculoides Ocbimv22002350m.g N
Ogr01933 Ophisaurus gracilis Ogr01933 N
PHUM466620 Pediculus humanus PHUM466620 N
PPAI004941 Phlebotomus papatasi PPAI004941 N
Pvit_07906 Pogona vitticeps Pvit_07906 N
RPRC011455 Rhodnius prolixus RPRC011455 N
Sakowv30004245m.g Saccoglossus kowalevskii Sakowv30004245m.g N
SMAR001697 Strigamia maritima SMAR001697 N
TC012001 Tribolium castaneum TC012001 N
camta2 Xenopus tropicalis XB-GENE-1033052 N
XP_002933905 Xenopus tropicalis XP_002933905 N