CPIJ015363 (Culex quinquefasciatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CPIJ015363 T206159_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.760 0.522
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.760 0.522
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.760 0.522
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.760 0.522
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.760 0.522
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.760 0.522
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.760 0.522
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.760 0.522
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.760 0.522
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.744 0.370
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.744 0.370
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.744 0.370
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPIJ015363-PA Homeodomain 131 176

Links

Other Homeodomain family TFs
Other Culex quinquefasciatus TFs

1235 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh_masked-piw_contig_420-abinit-gene-0.23 Pythium iwayamai fgenesh_masked-piw_contig_420-abinit-gene-0.23 N
maker-pir_contig_1946-fgenesh-gene-0.1 Pythium irregulare maker-pir_contig_1946-fgenesh-gene-0.1 N
maker-pir_contig_2261-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_2261-fgenesh-gene-0.0 N
maker-pir_contig_836-fgenesh-gene-0.2 Pythium irregulare maker-pir_contig_836-fgenesh-gene-0.2 N
PYU1_G006447 Pythium ultimum PYU1_G006447 N
PYU1_G006450 Pythium ultimum PYU1_G006450 N
PYU1_G014993 Pythium ultimum PYU1_G014993 N
PYU1_G014994 Pythium ultimum PYU1_G014994 N