IRX3 (Bos taurus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSBTAG00000012083 T207460_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx3
M00453_2.00 		Mus musculus
NNDACAHNNN
NNNDTGTHNN		 PBM
Berger et al.(2008)
Irx3_0920 		0.867 1.000
Irx3
M00454_2.00 		Mus musculus
NNDACWHN
NDWGTHNN		 PBM
Berger et al.(2008)
Irx3_2226 		0.867 1.000
Irx3
M03266_2.00 		Mus musculus
WWTKTCATGTWR
YWACATGAMAWW		 SELEX
Jolma et al.(2013)
Irx3_1 		0.867 1.000
IRX1
M05283_2.00 		Homo sapiens
DDCRHNNNNNNNNDYGHH
DDCRHNNNNNNNNDYGHH		 SELEX
Yin et al.(2017)
IRX1_eDBD_HT-SELEX 		0.867 1.000
IRX3
M05319_2.00 		Homo sapiens
DACAHGNWWWWNCDTGTH
DACAHGNWWWWNCDTGTH		 SELEX
Yin et al.(2017)
IRX3_eDBD_HT-SELEX 		0.867 1.000
IRX1
M05284_2.00 		Homo sapiens
NNCRHNNNNNNNNDYVHN
NDBRHNNNNNNNNDYGNN		 SELEX
Yin et al.(2017)
IRX1_eDBD_Methyl-HT-SELEX 		0.867 1.000
IRX3
M05320_2.00 		Homo sapiens
DACRYRHNWWNDYKCGTW
WACGMRHNWWNDYRYGTH		 SELEX
Yin et al.(2017)
IRX3_eDBD_Methyl-HT-SELEX 		0.867 1.000
mirr
M06514_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0233.1 		0.834 0.947
mirr
M06305_2.00 		Drosophila melanogaster
NDNWWACA
TGTWWNHN		 B1H
Zhu et al.(2011)
Mirr_Cell_FBgn0014343 		0.834 0.947
mirr
M06306_2.00 		Drosophila melanogaster
DDWACA
TGTWHH		 B1H
Zhu et al.(2011)
Mirr_SOLEXA_FBgn0014343 		0.834 0.947
SNAPOd2T00005194001
M02229_2.00 		Oikopleura dioica
NNTACATGTDN
NHACATGTANN		 PBM
Weirauch et al.(2014)
pTH5976 		0.810 0.772
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000016022 Homeodomain 130 187

Links

Other Homeodomain family TFs
Other Bos taurus TFs

291 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000000053 Ailuropoda melanoleuca ENSAMEG00000000053 I
FOXR1 Bos taurus ENSBTAG00000014606 I
ENSBTAP00000019450-D1 Bos grunniens ENSBTAP00000019450-D1 I
FOXR1 Canis familiaris ENSCAFG00000012417 I
FOXR1 Callithrix jacchus ENSCJAG00000013656 I
ENSCPOG00000001855 Cavia porcellus ENSCPOG00000001855 I
ENSCSAG00000002556 Chlorocebus sabaeus ENSCSAG00000002556 I
ENSDORG00000001960 Dipodomys ordii ENSDORG00000001960 I
FOXR1 Equus caballus ENSECAG00000016285 I
FOXR1 Felis catus ENSFCAG00000004719 I
FOXR1 Homo sapiens ENSG00000176302 D
FOXR1 Gorilla gorilla ENSGGOG00000001177 I
FOXR1 Loxodonta africana ENSLAFG00000002252 I
ENSMICG00000002680 Microcebus murinus ENSMICG00000002680 I
ENSMMUG00000022722 Macaca mulatta ENSMMUG00000022722 I
ENSMPUG00000004890 Mustela putorius furo ENSMPUG00000004890 I
ENSNLEG00000007376 Nomascus leucogenys ENSNLEG00000007376 I
ENSOARG00000011919 Ovis aries ENSOARG00000011919 I
ENSOCUG00000003971 Oryctolagus cuniculus ENSOCUG00000003971 I
ENSOCUG00000016258 Oryctolagus cuniculus ENSOCUG00000016258 I
FOXR1 Otolemur garnettii ENSOGAG00000007258 I
ENSOPRG00000016177 Ochotona princeps ENSOPRG00000016177 I
ENSP00000314806 Macaca fascicularis ENSP00000314806 I
ENSPANG00000008911 Papio anubis ENSPANG00000008911 I
ENSPPYG00000003947 Pongo abelii ENSPPYG00000003947 I
FOXR1 Pan troglodytes ENSPTRG00000004358 I
FOXR1 Pteropus vampyrus ENSPVAG00000012488 I
FOXR1 Sus scrofa ENSSSCG00000015101 I
ENSSTOG00000014321 Ictidomys tridecemlineatus ENSSTOG00000014321 I
ENSTSYG00000002924 Tarsius syrichta ENSTSYG00000002924 I