ENSDORG00000013256 (Dipodomys ordii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSDORG00000013256 T209040_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nkx3-1
M00170_2.00 		Mus musculus
NDAAGTRBNN
NNVYACTTHN		 PBM
Badis et al.(2009)
Nkx3-1_2923 		0.326 1.000
Nkx3-1
M00420_2.00 		Mus musculus
NNAAGTRBNN
NNVYACTTNN		 PBM
Berger et al.(2008)
Nkx3-1_2923 		0.326 1.000
NKX3-1
M05255_2.00 		Homo sapiens
NNTAAGTGSN
NSCACTTANN		 SELEX
Yin et al.(2017)
NKX3-1_eDBD_HT-SELEX 		0.326 1.000
NKX3-1
M09154_2.00 		Homo sapiens
NYDAAGTGBYWD
HWRVCACTTHRN		 Misc
Kulakovskiy et al.(2013)
NKX31_HUMAN.H11MO.0.C 		0.326 1.000
Nkx3-1
M09184_2.00 		Mus musculus
NYDAAGTGBYWD
HWRVCACTTHRN		 Misc
Kulakovskiy et al.(2013)
NKX31_MOUSE.H11MO.0.C 		0.326 1.000
NKX3-1
M09559_2.00 		Homo sapiens
BTRAGTRBYY
RRVYACTYAV		 Misc
Heinz et al.(2010)
LNCaP-Nkx3.1_GSE28264 		0.326 1.000
NKX3-1
M10729_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GT1_Q6_01 		0.326 1.000
NKX3-1
M10730_2.00 		Homo sapiens
NWWTAAGTATWH
DWATACTTAWWN		 Transfac
Matys et al.(2006)
V$NKX3A_01 		0.326 1.000
NKX3-1
M10731_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NKX3A_Q3 		0.326 1.000
NKX3-1
M05256_2.00 		Homo sapiens
NNTAAGTGBN
NVCACTTANN		 SELEX
Yin et al.(2017)
NKX3-1_eDBD_Methyl-HT-SELEX_1 		0.326 1.000
NKX3-1
M05257_2.00 		Homo sapiens
NTAAYSWB
VWSRTTAN		 SELEX
Yin et al.(2017)
NKX3-1_eDBD_Methyl-HT-SELEX_2 		0.326 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000012461 Homeodomain 86 127

Links

Other Homeodomain family TFs
Other Dipodomys ordii TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB002056 Anopheles albimanus AALB002056 I 0.636
AALB004801 Anopheles albimanus AALB004801 N 0.648
AALB004916 Anopheles albimanus AALB004916 I 0.607
AALB007707 Anopheles albimanus AALB007707 I 0.605
Aan_R009033 Calypte anna Aan_R009033 I 0.623
Aan_R009659 Calypte anna Aan_R009659 N 0.657
AARA005693 Anopheles arabiensis AARA005693 N 0.682
AATE014392 Anopheles atroparvus AATE014392 I 0.617
ACAC_0001212901 Angiostrongylus cantonensis ACAC_0001212901 I 0.603
ACEP16435 Atta cephalotes ACEP16435 N 0.648
ACEP22182 Atta cephalotes ACEP22182 I 0.609
ACEP22767 Atta cephalotes ACEP22767 I 0.636
ACUA018681 Anopheles culicifacies ACUA018681 N 0.648
ADIR007401 Anopheles dirus ADIR007401 N 0.682
ADIR008635 Anopheles dirus ADIR008635 I 0.617
AEPI004567 Anopheles epiroticus AEPI004567 N 0.682
AFAF010529 Anopheles farauti AFAF010529 N 0.702
Afo_R008451 Aptenodytes forsteri Afo_R008451 I 0.608
AFUN001618 Anopheles funestus AFUN001618 I 0.648
AFUN006141 Anopheles funestus AFUN006141 N 0.682
AFUN006142 Anopheles funestus AFUN006142 N 0.682
Alligator_sinensis_CCG004474.1 Alligator sinensis Alligator_sinensis_CCG004474.1 I 0.623
Alligator_sinensis_CCG010661.1 Alligator sinensis Alligator_sinensis_CCG010661.1 I 0.622
ALUE_0000610701 Ascaris lumbricoides ALUE_0000610701 I 0.640
AMEC014801 Anopheles melas AMEC014801 N 0.631
AMEC018259 Anopheles melas AMEC018259 I 0.617
AMEM013417 Anopheles merus AMEM013417 I 0.617
AMIN011034 Anopheles minimus AMIN011034 N 0.682
ANCDUO_12194 Ancylostoma duodenale ANCDUO_12194 I 0.681
AQUA011153 Anopheles quadriannulatus AQUA011153 N 0.682
ASIS013253 Anopheles sinensis ASIS013253 I 0.617
ASTEI06400 Anopheles stephensi ASTEI06400 N 0.682
ASU_12993 Ascaris suum ASU_12993 I 0.648
BGIBMGA011355 Bombyx mori BGIBMGA011355 N 0.631
BGLB001079 Biomphalaria glabrata BGLB001079 N 0.639
BGLB001192 Biomphalaria glabrata BGLB001192 I 0.636
Brh_R006136 Buceros rhinoceros Brh_R006136 I 0.617
CapteG41929 Capitella teleta CapteG41929 I 0.605
Ca_12504 Cicer arietinum Ca_12504 N 0.615
CBN30161 Caenorhabditis brenneri CBN30161 I 0.637
CBN30402 Caenorhabditis brenneri CBN30402 I 0.637
CLEC012266 Cimex lectularius CLEC012266 N 0.682
Cmyd_10004252 Chelonia mydas Cmyd_10004252 I 0.605
Cmyd_10016952 Chelonia mydas Cmyd_10016952 I 0.664
CPIJ009086 Culex quinquefasciatus CPIJ009086 I 0.636
CPIJ016099 Culex quinquefasciatus CPIJ016099 N 0.648
CpipJ_CPIJ009086 Culex pipiens CpipJ_CPIJ009086 I 0.636
CpipJ_CPIJ016099 Culex pipiens CpipJ_CPIJ016099 N 0.648
csin111071 Clonorchis sinensis csin111071 N 0.633
D915_01034 Fasciola hepatica D915_01034 N 0.627
DICVIV_05702 Dictyocaulus viviparus DICVIV_05702 I 0.603
DILT_0001226501 Diphyllobothrium latum DILT_0001226501 I 0.668
DME_0000147601 Dracunculus medinensis DME_0000147601 I 0.603
EEL_0000283301 Elaeophora elaphi EEL_0000283301 N 0.622
ENSACAG00000002042 Anolis carolinensis ENSACAG00000002042 N 0.639
ENSAMEG00000002866 Ailuropoda melanoleuca ENSAMEG00000002866 I 0.326
ENSAMEG00000004941 Ailuropoda melanoleuca ENSAMEG00000004941 I 0.605
ENSAPLG00000006374 Anas platyrhynchos ENSAPLG00000006374 N 0.657
ENSAPLG00000010700 Anas platyrhynchos ENSAPLG00000010700 I 0.623
NKX3-1 Bos taurus ENSBTAG00000001221 I 0.326
ENSBTAP00000001615-D1 Bos grunniens ENSBTAP00000001615-D1 I 0.326
ENSBTAP00000006353-D1 Bos grunniens ENSBTAP00000006353-D1 I 0.605
ENSCAFG00000009107 Canis familiaris ENSCAFG00000009107 I 0.326
DBX1 Canis familiaris ENSCAFG00000009813 N 0.631
EMX2 Choloepus hoffmanni ENSCHOG00000004674 I 0.636
ENSCHOG00000011132 Choloepus hoffmanni ENSCHOG00000011132 I 0.326
NKX3-1 Callithrix jacchus ENSCJAG00000020092 I 0.326
ENSCSAG00000016229 Chlorocebus sabaeus ENSCSAG00000016229 I 0.326
emx3 Danio rerio ENSDARG00000020417 I 0.636
NKX3-1 Dasypus novemcinctus ENSDNOG00000044451 I 0.326
NKX3-1 Erinaceus europaeus ENSEEUG00000001113 I 0.326
ENSEEUG00000014300 Erinaceus europaeus ENSEEUG00000014300 N 0.682
HLX Echinops telfairi ENSETEG00000003298 I 0.690
HOXC4 Echinops telfairi ENSETEG00000017258 I 0.634
ENSFALG00000002206 Ficedula albicollis ENSFALG00000002206 I 0.623
ENSFALG00000012045 Ficedula albicollis ENSFALG00000012045 N 0.639
NKX3-1 Homo sapiens ENSG00000167034 D 0.326
ENSGALG00000027554 Gallus gallus ENSGALG00000027554 N 0.657
NKX3-1 Gorilla gorilla ENSGGOG00000014369 I 0.326
ENSGGOG00000027271 Gorilla gorilla ENSGGOG00000027271 I 0.623
ENSGMOG00000002488 Gadus morhua ENSGMOG00000002488 N 0.631
ENSMEUG00000003167 Macropus eugenii ENSMEUG00000003167 I 0.806
NKX3-1 Microcebus murinus ENSMICG00000011189 I 0.326
NKX3-1 Macaca mulatta ENSMMUG00000009796 I 0.326
ENSMMUP00000035614 Macaca fascicularis ENSMMUP00000035614 I 0.623
NKX3-1 Monodelphis domestica ENSMODG00000016789 I 0.326
Nkx3-1 Mus musculus ENSMUSG00000022061 D 0.326
ENSNLEG00000015968 Nomascus leucogenys ENSNLEG00000015968 I 0.326
NKX3-1 Ornithorhynchus anatinus ENSOANG00000008027 I 0.326
ENSOANG00000030226 Ornithorhynchus anatinus ENSOANG00000030226 I 0.608
ENSOARG00000010071 Ovis aries ENSOARG00000010071 I 0.326
NKX3-1 Oryctolagus cuniculus ENSOCUG00000004294 I 0.326
NKX3-1 Otolemur garnettii ENSOGAG00000001303 I 0.326
ENSOPRG00000009359 Ochotona princeps ENSOPRG00000009359 I 0.623
ENSOPRG00000015148 Ochotona princeps ENSOPRG00000015148 N 0.702
ENSP00000370253 Macaca fascicularis ENSP00000370253 I 0.326
ENSPANG00000004934 Papio anubis ENSPANG00000004934 I 0.326
ENSPCAG00000016644 Procavia capensis ENSPCAG00000016644 I 0.326
ENSPPYG00000018442 Pongo abelii ENSPPYG00000018442 I 0.326
NKX3-1 Pan troglodytes ENSPTRG00000020081 I 0.326
VAX2 Pteropus vampyrus ENSPVAG00000002902 I 0.623
MNX1 Pteropus vampyrus ENSPVAG00000006643 I 0.605
Nkx3-1 Rattus norvegicus ENSRNOG00000015477 I 0.326
ENSSARG00000001895 Sorex araneus ENSSARG00000001895 I 0.326
HLX Sorex araneus ENSSARG00000009476 I 0.690
ENSSHAG00000015475 Sarcophilus harrisii ENSSHAG00000015475 I 0.326
ENSSHAG00000015712 Sarcophilus harrisii ENSSHAG00000015712 I 0.603
ENSSSCG00000010671 Sus scrofa ENSSSCG00000010671 I 0.603
ENSSSCG00000028216 Sus scrofa ENSSSCG00000028216 I 0.326
ENSTBEG00000002319 Tupaia belangeri ENSTBEG00000002319 I 0.326
ENSTBEG00000005783 Tupaia belangeri ENSTBEG00000005783 N 0.682
ENSTGUG00000002708 Taeniopygia guttata ENSTGUG00000002708 N 0.639
emx3 Tetraodon nigroviridis ENSTNIG00000012965 I 0.636
ENSTNIG00000016985 Tetraodon nigroviridis ENSTNIG00000016985 N 0.604
ENSTNIG00000018605 Tetraodon nigroviridis ENSTNIG00000018605 I 0.679
emx1 Takifugu rubripes ENSTRUG00000001305 I 0.636
emx1 Takifugu rubripes ENSTRUG00000003603 I 0.636
ENSTRUG00000006182 Takifugu rubripes ENSTRUG00000006182 I 0.603
MICALL2 Takifugu rubripes ENSTRUG00000013527 I 0.679
nkx3.2 Takifugu rubripes ENSTRUG00000014438 I 0.775
ENSTSYG00000007023 Tarsius syrichta ENSTSYG00000007023 I 0.636
ENSTSYG00000007109 Tarsius syrichta ENSTSYG00000007109 I 0.326
NKX3-1 Vicugna pacos ENSVPAG00000004503 I 0.326
ENSXMAG00000003757 Xiphophorus maculatus ENSXMAG00000003757 I 0.623
ENSXMAG00000020166 Xiphophorus maculatus ENSXMAG00000020166 I 0.608
e_gw.5.534.1 Branchiostoma floridae e_gw.5.534.1 I 0.687
e_gw.5.535.1 Branchiostoma floridae e_gw.5.535.1 I 0.687
Gfo_R010904 Geospiza fortis Gfo_R010904 N 0.639
GPLIN_001352400 Globodera pallida GPLIN_001352400 I 0.602
Hba_05336 Heterorhabditis bacteriophora Hba_05336 I 0.603
HDID_0000158701 Hymenolepis diminuta HDID_0000158701 N 0.665
HDID_0000783701 Hymenolepis diminuta HDID_0000783701 I 0.600
ISCW011755 Ixodes scapularis ISCW011755 N 0.632
ISCW012144 Ixodes scapularis ISCW012144 I 0.603
L798_10069 Zootermopsis nevadensis L798_10069 N 0.648
L892_g2163 Steinernema scapterisci L892_g2163 N 0.632
L893_g32186 Steinernema glaseri L893_g32186 N 0.616
L893_g7450 Steinernema glaseri L893_g7450 N 0.622
LCUP015731 Lucilia cuprina LCUP015731 N 0.631
LDEC001875 Leptinotarsa decemlineata LDEC001875 N 0.631
LotgiG56601 Lottia gigantea LotgiG56601 I 0.632
maker-nMf.1.1.scaf07538-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf07538-augustus-gene-0.6 N 0.616
MCINX013655 Melitaea cinxia MCINX013655 N 0.657
MESCA002805 Megaselia scalaris MESCA002805 I 0.607
MESCA003774 Megaselia scalaris MESCA003774 I 0.605
MhA1_Contig2487.frz3.gene2 Meloidogyne hapla MhA1_Contig2487.frz3.gene2 I 0.603
Minc06164 Meloidogyne incognita Minc06164 I 0.607
Minc09570 Meloidogyne incognita Minc09570 I 0.681
nDi.2.2.2.g12576 Dirofilaria immitis nDi.2.2.2.g12576 I 0.648
NEMVEDRAFT_v1g94003 Nematostella vectensis NEMVEDRAFT_v1g94003 N 0.641
nOo.2.0.1.g11932 Onchocerca ochengi nOo.2.0.1.g11932 I 0.636
nRc.2.0.1.g25699 Romanomermis culicivorax nRc.2.0.1.g25699 I 0.603
Ocbimv22038272m.g Octopus bimaculoides Ocbimv22038272m.g N 0.690
Ogr16578 Ophisaurus gracilis Ogr16578 I 0.623
PEQ_0000039001 Parascaris equorum PEQ_0000039001 I 0.599
PEQ_0000891801 Parascaris equorum PEQ_0000891801 I 0.607
PPAI003680 Phlebotomus papatasi PPAI003680 N 0.657
PXEA_0002876601 Protopolystoma xenopodis PXEA_0002876601 I 0.648
RPRC010410 Rhodnius prolixus RPRC010410 I 0.636
RPRC011993 Rhodnius prolixus RPRC011993 N 0.631
SBAD_0000059701 Soboliphyme baturini SBAD_0000059701 N 0.631
SBAD_0000661201 Soboliphyme baturini SBAD_0000661201 I 0.610
SCUD_0000356901 Schistosoma curassoni SCUD_0000356901 N 0.663
SINV13310 Solenopsis invicta SINV13310 N 0.682
SINV25862 Solenopsis invicta SINV25862 I 0.605
SMUV_0000791901 Syphacia muris SMUV_0000791901 I 0.637
SPER_0000200201 Spirometra erinaceieuropaei SPER_0000200201 N 0.677
SSLN_0001021301 Schistocephalus solidus SSLN_0001021301 I 0.668
SSLN_0001900001 Schistocephalus solidus SSLN_0001900001 N 0.644
T265_04102 Opisthorchis viverrini T265_04102 N 0.684
T265_13587 Opisthorchis viverrini T265_13587 I 0.618
TELCIR_16193 Teladorsagia circumcincta TELCIR_16193 I 0.603
TELCIR_24055 Teladorsagia circumcincta TELCIR_24055 I 0.603
TRE_0001634301 Trichobilharzia regenti TRE_0001634301 N 0.644
TRE_0001854501 Trichobilharzia regenti TRE_0001854501 N 0.782
TTAC_0001113501 Hydatigera taeniaeformis TTAC_0001113501 N 0.629
WUBG_08134 Wuchereria bancrofti WUBG_08134 N 0.622