CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DUXA
(
Equus caballus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSECAG00000021112
T209179_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DUXA
M01247_2.00
Homo sapiens
NTGATTRNN
NNYAATCAN
PBM
Lambert et al.(2019)
pTH11226
0.833
0.841
DUXA
M03244_2.00
Homo sapiens
NHRAYBYAATCAN
NTGATTRVRTYDN
SELEX
Jolma et al.(2013)
DUXA_1
0.833
0.841
DUXA
M05402_2.00
Homo sapiens
TRAYBYAATCA
TGATTRVRTYA
SELEX
Yin et al.(2017)
DUXA_eDBD_HT-SELEX
0.833
0.841
DUXA
M10756_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DUXA_02
0.833
0.841
DUXA
M05403_2.00
Homo sapiens
YRAYBYAATCA
TGATTRVRTYR
SELEX
Yin et al.(2017)
DUXA_eDBD_Methyl-HT-SELEX
0.833
0.841
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000018531
Homeodomain
3
59
RRSRTKFTEDQLKILINAFNQKPYPSYATKQRLALEINTEESRIQIWFQNRRARHRF
ENSECAP00000018531
Homeodomain
88
143
RRCRTSYTSSQLHTLIEAFMNNPYPGIDSRQQLAIEIGVPESRIQIWFQNRRSRCH
Links
Other
Homeodomain
family TFs
Other
Equus caballus
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL009092
Aedes aegypti
AAEL009092
N
AALB003420
Anopheles albimanus
AALB003420
N
ACYPI008958
Acyrthosiphon pisum
ACYPI008958
N
ADAC010420
Anopheles darlingi
ADAC010420
N
AEPI009380
Anopheles epiroticus
AEPI009380
N
AFAF012002
Anopheles farauti
AFAF012002
N
AGAP001761
Anopheles gambiae
AGAP001761
N
AMEM008456
Anopheles merus
AMEM008456
N
Cflo_01607--XP_001123059.1_APIME
Camponotus floridanus
Cflo_01607--XP_001123059.1_APIME
N
CLEC001936
Cimex lectularius
CLEC001936
N
CPIJ012963
Culex quinquefasciatus
CPIJ012963
N
CpipJ_CPIJ012963
Culex pipiens
CpipJ_CPIJ012963
N
ENSAMXG00000012483
Astyanax mexicanus
ENSAMXG00000012483
N
cers3b
Danio rerio
ENSDARG00000036337
N
ENSGACG00000002760
Gasterosteus aculeatus
ENSGACG00000002760
N
ENSLOCG00000004390
Lepisosteus oculatus
ENSLOCG00000004390
N
ENSMICG00000014767
Microcebus murinus
ENSMICG00000014767
N
CERS5
Oryzias latipes
ENSORLG00000010219
N
ENSPFOG00000013551
Poecilia formosa
ENSPFOG00000013551
N
ENSSHAG00000001540
Sarcophilus harrisii
ENSSHAG00000001540
N
ENSSHAG00000003870
Sarcophilus harrisii
ENSSHAG00000003870
N
cers4b
Takifugu rubripes
ENSTRUG00000000191
N
estExt_gwp.C_860189
Branchiostoma floridae
estExt_gwp.C_860189
N
e_gw.479.83.1
Branchiostoma floridae
e_gw.479.83.1
N
HelroG82517
Helobdella robusta
HelroG82517
N
HHAL005214-PA
Halyomorpha halys
HHAL005214-PA
N
HMEL006147
Heliconius melpomene
HMEL006147
N
Hsal_14209--XP_001123059.1_APIME
Harpegnathos saltator
Hsal_14209--XP_001123059.1_APIME
N
KGM_15429
Danaus plexippus
KGM_15429
N
KGM_16996
Danaus plexippus
KGM_16996
N
L798_00373
Zootermopsis nevadensis
L798_00373
N
LDEC003623
Leptinotarsa decemlineata
LDEC003623
N
LotgiG226091
Lottia gigantea
LotgiG226091
N
MCINX005366
Melitaea cinxia
MCINX005366
N
MCINX005367
Melitaea cinxia
MCINX005367
N
RPRC008736
Rhodnius prolixus
RPRC008736
N
SINV20227
Solenopsis invicta
SINV20227
N
SINV24013
Solenopsis invicta
SINV24013
N
TC006052
Tribolium castaneum
TC006052
N
cers3.L
Xenopus laevis
XB-GENE-6251639
N
YQE_11876
Dendroctonus ponderosae
YQE_11876
N