CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DUXA
(
Felis catus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSFCAG00000007545
T209653_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DUXA
M01247_2.00
Homo sapiens
NTGATTRNN
NNYAATCAN
PBM
Lambert et al.(2019)
pTH11226
0.816
0.788
DUXA
M03244_2.00
Homo sapiens
NHRAYBYAATCAN
NTGATTRVRTYDN
SELEX
Jolma et al.(2013)
DUXA_1
0.816
0.788
DUXA
M05402_2.00
Homo sapiens
TRAYBYAATCA
TGATTRVRTYA
SELEX
Yin et al.(2017)
DUXA_eDBD_HT-SELEX
0.816
0.788
DUXA
M10756_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DUXA_02
0.816
0.788
DUXA
M05403_2.00
Homo sapiens
YRAYBYAATCA
TGATTRVRTYR
SELEX
Yin et al.(2017)
DUXA_eDBD_Methyl-HT-SELEX
0.816
0.788
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000006988
Homeodomain
16
72
RRSRTKFTQDQLKILIKAFDKNPYPGYATKQKLALEVNTEESRIQIWFQNRRARHQK
ENSFCAP00000006988
Homeodomain
99
154
RRSRTNYTSLQLHALIEAFSNNPYPGFDSREQLAKEIGVPESRVQIWFQNRRSRFH
Links
Other
Homeodomain
family TFs
Other
Felis catus
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_022_00282
Aquilegia coerulea
Aquca_022_00282
I
Ciclev10001200m.g
Citrus clementina
Ciclev10001200m.g
N
GSMUA_Achr11G09000_001
Musa acuminata
GSMUA_Achr11G09000_001
N
orange1.1g036240m.g
Citrus sinensis
orange1.1g036240m.g
N
TCM_028313
Theobroma cacao
TCM_028313
N