ENSLACG00000006977 (Latimeria chalumnae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSLACG00000006977 T210793_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.777 0.543
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.777 0.543
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.777 0.543
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.777 0.543
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.777 0.543
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.777 0.543
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.777 0.543
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.777 0.543
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.777 0.543
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.734 0.391
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.734 0.391
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.734 0.391
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000007882 Homeodomain 138 183
ENSLACP00000007883 Homeodomain 114 159

Links

Other Homeodomain family TFs
Other Latimeria chalumnae TFs

1230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_083620 Aspergillus clavatus CADACLAG00007771 I 0.000
CADAFLAG00009914 Aspergillus flavus CADAFLAG00009914 I 0.000
AFUA_6G08790 Aspergillus fumigatus CADAFUAG00001570 I 0.000
CADANGAG00008951 Aspergillus niger CADANGAG00008951 I 0.000
ANIA_01729 Aspergillus nidulans CADANIAG00008374 D 0.000
NFIA_054440 Neosartorya fischeri CADNFIAG00005184 I 0.000
EURHEDRAFT_377589 Aspergillus ruber EURHEDRAFT_377589 I 0.000
fgenesh1_pm.00118_#_285 Aspergillus carbonarius fgenesh1_pm.00118_#_285 I 0.000
OIDMADRAFT_106725 Oidiodendron maius OIDMADRAFT_106725 I 0.000
Pc12g08840 Penicillium chrysogenum Pc12g08840 I 0.000
PCH_Pc12g08840 Penicillium rubens PCH_Pc12g08840 I 0.000
PDE_08811 Penicillium oxalicum PDE_08811 I 0.000
PDIP_36160 Penicillium digitatum PDIP_36160 I 0.000
PEX1_074170 Penicillium expansum PEX1_074170 I 0.000
PITC_096370 Penicillium italicum PITC_096370 I 0.000
PMAA_073600 Talaromyces marneffei PMAA_073600 I 0.000
PMAA_073600 Penicillium marneffei PMAA_073600 I 0.000
PVAR5_3823 Byssochlamys spectabilis PVAR5_3823 N 0.000
TSTA_094060 Talaromyces stipitatus TSTA_094060 I 0.000
U727_0043150051 Penicillium solitum U727_0043150051 I 0.000