LHX4 (Ornithorhynchus anatinus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSOANG00000000969 T212794_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.726 0.370
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.726 0.370
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.726 0.370
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.726 0.370
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.726 0.370
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.726 0.370
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.726 0.370
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.726 0.370
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.726 0.370
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.717 0.261
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.717 0.261
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.717 0.261
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000001534 Homeodomain 132 177

Links

Other Homeodomain family TFs
Other Ornithorhynchus anatinus TFs

1215 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R002403 Calypte anna Aan_R002403 N
Alligator_sinensis_CCG001820.1 Alligator sinensis Alligator_sinensis_CCG001820.1 N
Cmyd_10005054 Chelonia mydas Cmyd_10005054 N
GATAD2B Anolis carolinensis ENSACAG00000008791 N
ENSAMEG00000012036 Ailuropoda melanoleuca ENSAMEG00000012036 N
ENSAMXG00000001813 Astyanax mexicanus ENSAMXG00000001813 N
ENSAMXG00000014687 Astyanax mexicanus ENSAMXG00000014687 N
ENSAPLG00000011761 Anas platyrhynchos ENSAPLG00000011761 N
GATAD2B Bos taurus ENSBTAG00000006678 N
ENSBTAP00000008766-D1 Bos grunniens ENSBTAP00000008766-D1 N
GATAD2B Canis familiaris ENSCAFG00000017433 N
GATAD2B Choloepus hoffmanni ENSCHOG00000013411 N
GATAD2B Callithrix jacchus ENSCJAG00000010131 N
GATAD2B Cavia porcellus ENSCPOG00000010326 N
ENSCSAG00000001881 Chlorocebus sabaeus ENSCSAG00000001881 N
gatad2b Danio rerio ENSDARG00000005834 N
GATAD2B Dasypus novemcinctus ENSDNOG00000048326 N
Gatad2b Dipodomys ordii ENSDORG00000013431 N
GATAD2B Equus caballus ENSECAG00000011357 N
GATAD2B Felis catus ENSFCAG00000002751 N
GATAD2B Homo sapiens ENSG00000143614 N
gatad2b Gasterosteus aculeatus ENSGACG00000000510 N
ENSGALG00000029154 Gallus gallus ENSGALG00000029154 N
GATAD2B Gorilla gorilla ENSGGOG00000012553 N
ENSGMOG00000013793 Gadus morhua ENSGMOG00000013793 N
ENSLACG00000013888 Latimeria chalumnae ENSLACG00000013888 N
GATAD2B Loxodonta africana ENSLAFG00000002667 N
ENSLOCG00000008705 Lepisosteus oculatus ENSLOCG00000008705 N
ENSMEUG00000007551 Macropus eugenii ENSMEUG00000007551 N
ENSMGAG00000017205 Meleagris gallopavo ENSMGAG00000017205 N
GATAD2B Microcebus murinus ENSMICG00000008874 N
GATAD2B Myotis lucifugus ENSMLUG00000004859 N
GATAD2B Macaca mulatta ENSMMUG00000002696 N
GATAD2B Monodelphis domestica ENSMODG00000017336 N
ENSMPUG00000008136 Mustela putorius furo ENSMPUG00000008136 N
Gatad2b Mus musculus ENSMUSG00000042390 N
ENSNLEG00000010649 Nomascus leucogenys ENSNLEG00000010649 N
ENSOARG00000001486 Ovis aries ENSOARG00000001486 N
GATAD2B Oryctolagus cuniculus ENSOCUG00000008135 N
GATAD2B Otolemur garnettii ENSOGAG00000004606 N
ENSONIG00000010369 Oreochromis niloticus ENSONIG00000010369 N
GATAD2B Ochotona princeps ENSOPRG00000000027 N
gatad2b Oryzias latipes ENSORLG00000010868 N
ENSP00000357644 Macaca fascicularis ENSP00000357644 N
ENSPANG00000008972 Papio anubis ENSPANG00000008972 N
GATAD2B Procavia capensis ENSPCAG00000001797 N
ENSPFOG00000008182 Poecilia formosa ENSPFOG00000008182 N
ENSPPYG00000029612 Pongo abelii ENSPPYG00000029612 N
ENSPSIG00000004590 Pelodiscus sinensis ENSPSIG00000004590 N
GATAD2B Pan troglodytes ENSPTRG00000001364 N
GATAD2B Pteropus vampyrus ENSPVAG00000011082 N
Gatad2b Rattus norvegicus ENSRNOG00000015553 N
GATAD2B Sorex araneus ENSSARG00000011365 N
ENSSHAG00000011064 Sarcophilus harrisii ENSSHAG00000011064 N
GATAD2B Sus scrofa ENSSSCG00000006562 N
ENSSTOG00000005407 Ictidomys tridecemlineatus ENSSTOG00000005407 N
GATAD2B Tupaia belangeri ENSTBEG00000015791 N
gatad2b Tetraodon nigroviridis ENSTNIG00000002290 N
gatad2b Takifugu rubripes ENSTRUG00000002877 N
ENSTSYG00000012560 Tarsius syrichta ENSTSYG00000012560 N
GATAD2B Tursiops truncatus ENSTTRG00000014779 N
GATAD2B Vicugna pacos ENSVPAG00000010268 N
ENSXMAG00000010412 Xiphophorus maculatus ENSXMAG00000010412 N
Gfo_R009850 Geospiza fortis Gfo_R009850 N
Myotis_brandtii_GATAD2B_10031899 Myotis brandtii Myotis_brandtii_GATAD2B_10031899 N
Ogr01497 Ophisaurus gracilis Ogr01497 N
Pvit_02350 Pogona vitticeps Pvit_02350 N
gatad2b Xenopus tropicalis XB-GENE-5995517 N