CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSOCUG00000001021
(
Oryctolagus cuniculus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSOCUG00000001021
T213093_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.821
0.609
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.821
0.609
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.821
0.609
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.821
0.609
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.821
0.609
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.821
0.609
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.821
0.609
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.821
0.609
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.821
0.609
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.718
0.370
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.718
0.370
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.718
0.370
PHOX2B
M00282_2.00
Homo sapiens
TAATTRRY
RYYAATTA
PBM
Barrera et al.(2016)
PHOX2B_REF
0.377
1.000
Phox2a
M00400_2.00
Mus musculus
NNHAAYNN
NNRTTDNN
PBM
Berger et al.(2008)
Phox2a_3947
0.377
1.000
Phox2b
M00401_2.00
Mus musculus
NNHAAYNN
NNRTTDNN
PBM
Berger et al.(2008)
Phox2b_3948
0.377
1.000
PHOX2A
M03194_2.00
Homo sapiens
TAATTRVRTTA
TAAYBYAATTA
SELEX
Jolma et al.(2013)
PHOX2A_1
0.377
1.000
PHOX2B
M03113_2.00
Homo sapiens
TAATTRVRTTA
TAAYBYAATTA
SELEX
Jolma et al.(2013)
PHOX2B_1
0.377
1.000
PHOX2B
M03114_2.00
Homo sapiens
TAATTRVRTTA
TAAYBYAATTA
SELEX
Jolma et al.(2013)
PHOX2B_2
0.377
1.000
PHOX2A
M05244_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
PHOX2A_eDBD_HT-SELEX
0.377
1.000
PHOX2B
M05008_2.00
Homo sapiens
BTAATYRV
BYRATTAV
SELEX
Yin et al.(2017)
PHOX2B_eDBD_HT-SELEX
0.377
1.000
PHOX2B
M05010_2.00
Homo sapiens
TAATTWRATTA
TAATYWAATTA
SELEX
Yin et al.(2017)
PHOX2B_FL_HT-SELEX
0.377
1.000
Phox2a
M09564_2.00
Mus musculus
NTAATBNRATTA
TAATYNVATTAN
Misc
Heinz et al.(2010)
Neuron-Phox2a_GSE31456
0.377
1.000
PHOX2A
M05245_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
PHOX2A_eDBD_Methyl-HT-SELEX
0.377
1.000
PHOX2B
M05009_2.00
Homo sapiens
BTAATYRN
NYRATTAV
SELEX
Yin et al.(2017)
PHOX2B_eDBD_Methyl-HT-SELEX
0.377
1.000
PHOX2B
M05011_2.00
Homo sapiens
TAATTHRATTA
TAATYDAATTA
SELEX
Yin et al.(2017)
PHOX2B_FL_Methyl-HT-SELEX
0.377
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000000883
Homeodomain
99
144
RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQV
Links
Other
Homeodomain
family TFs
Other
Oryctolagus cuniculus
TFs
1325 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP26309
Atta cephalotes
ACEP26309
I
ACYPI003971
Acyrthosiphon pisum
ACYPI003971
I
Alligator_sinensis_CCG003052.1
Alligator sinensis
Alligator_sinensis_CCG003052.1
I
CAA76309
Xenopus laevis
CAA76309
I
Cflo_01516--XP_394681.2_APIME
Camponotus floridanus
Cflo_01516--XP_394681.2_APIME
I
CLEC002077
Cimex lectularius
CLEC002077
I
Cmyd_10017449
Chelonia mydas
Cmyd_10017449
I
DAPPUDRAFT_18594
Daphnia pulex
DAPPUDRAFT_18594
I
CEBPE
Anolis carolinensis
ENSACAG00000007268
I
CEBPB
Anolis carolinensis
ENSACAG00000015567
I
ENSAMEG00000007625
Ailuropoda melanoleuca
ENSAMEG00000007625
I
ENSAMEG00000008255
Ailuropoda melanoleuca
ENSAMEG00000008255
I
ENSAMEG00000013456
Ailuropoda melanoleuca
ENSAMEG00000013456
I
ENSAMXG00000026122
Astyanax mexicanus
ENSAMXG00000026122
I
CEBPE
Bos taurus
ENSBTAG00000005952
I
ENSCAFG00000007407
Canis familiaris
ENSCAFG00000007407
I
ENSCAFG00000011433
Canis familiaris
ENSCAFG00000011433
I
CEBPB
Canis familiaris
ENSCAFG00000031326
I
CEBPB
Callithrix jacchus
ENSCJAG00000000526
I
CEBPE
Callithrix jacchus
ENSCJAG00000008065
I
ENSCPOG00000000811
Cavia porcellus
ENSCPOG00000000811
I
CEBPE
Cavia porcellus
ENSCPOG00000014049
I
ENSCPOG00000023297
Cavia porcellus
ENSCPOG00000023297
I
ENSCSAG00000016086
Chlorocebus sabaeus
ENSCSAG00000016086
I
ENSCSAG00000018515
Chlorocebus sabaeus
ENSCSAG00000018515
I
ENSCSAG00000018746
Chlorocebus sabaeus
ENSCSAG00000018746
I
cebpa
Danio rerio
ENSDARG00000036074
I
CEBPA
Dasypus novemcinctus
ENSDNOG00000041488
I
CEBPB
Dasypus novemcinctus
ENSDNOG00000041573
I
CEBPE
Equus caballus
ENSECAG00000012883
I
CEBPE
Erinaceus europaeus
ENSEEUG00000005848
I
CEBPE
Echinops telfairi
ENSETEG00000000035
I
ENSFALG00000007785
Ficedula albicollis
ENSFALG00000007785
I
ENSFALG00000014081
Ficedula albicollis
ENSFALG00000014081
I
CEBPE
Felis catus
ENSFCAG00000002334
I
CEBPE
Homo sapiens
ENSG00000092067
D
CEBPB
Homo sapiens
ENSG00000172216
D
CEBPA
Homo sapiens
ENSG00000245848
D
CEBPB
Gallus gallus
ENSGALG00000008014
I
EBP
Gallus gallus
ENSGALG00000026525
I
CEBPE
Gorilla gorilla
ENSGGOG00000007419
I
CEBPB
Gorilla gorilla
ENSGGOG00000025010
I
ENSLACG00000002076
Latimeria chalumnae
ENSLACG00000002076
I
ENSLACG00000005924
Latimeria chalumnae
ENSLACG00000005924
I
ENSLAFG00000026180
Loxodonta africana
ENSLAFG00000026180
I
CEBPA
Loxodonta africana
ENSLAFG00000030435
I
CEBPE
Loxodonta africana
ENSLAFG00000031400
I
ENSLOCG00000017586
Lepisosteus oculatus
ENSLOCG00000017586
I
ENSLOCG00000018358
Lepisosteus oculatus
ENSLOCG00000018358
I
ENSMEUG00000000063
Macropus eugenii
ENSMEUG00000000063
I
ENSMICG00000002591
Microcebus murinus
ENSMICG00000002591
I
CEBPB
Myotis lucifugus
ENSMLUG00000002060
I
CEBPE
Myotis lucifugus
ENSMLUG00000030209
I
ENSMMUG00000004874
Macaca mulatta
ENSMMUG00000004874
I
CEBPA
Macaca mulatta
ENSMMUG00000006124
I
CEBPE
Macaca mulatta
ENSMMUG00000019652
I
CEBPE
Monodelphis domestica
ENSMODG00000004586
I
ENSMODG00000016314
Monodelphis domestica
ENSMODG00000016314
I
ENSMPUG00000006815
Mustela putorius furo
ENSMPUG00000006815
I
ENSMPUG00000007593
Mustela putorius furo
ENSMPUG00000007593
I
ENSMPUG00000019019
Mustela putorius furo
ENSMPUG00000019019
I
Cebpa
Mus musculus
ENSMUSG00000034957
D
Cebpe
Mus musculus
ENSMUSG00000052435
D
Cebpb
Mus musculus
ENSMUSG00000056501
D
ENSNLEG00000014958
Nomascus leucogenys
ENSNLEG00000014958
I
ENSOANG00000007645
Ornithorhynchus anatinus
ENSOANG00000007645
I
CEBPA
Ornithorhynchus anatinus
ENSOANG00000008144
I
ENSOARG00000004414
Ovis aries
ENSOARG00000004414
I
ENSOARG00000013395
Ovis aries
ENSOARG00000013395
I
ENSOARG00000019360
Ovis aries
ENSOARG00000019360
I
CEBPE
Oryctolagus cuniculus
ENSOCUG00000022235
I
CEBPB
Oryctolagus cuniculus
ENSOCUG00000024667
I
CEBPE
Otolemur garnettii
ENSOGAG00000001312
I
CEBPA
Otolemur garnettii
ENSOGAG00000024661
I
CEBPB
Otolemur garnettii
ENSOGAG00000026467
I
ENSONIG00000003300
Oreochromis niloticus
ENSONIG00000003300
I
cebpa
Oryzias latipes
ENSORLG00000018660
I
ENSP00000206513
Macaca fascicularis
ENSP00000206513
I
ENSP00000206513-D1
Bos grunniens
ENSP00000206513-D1
I
ENSPANG00000002974
Papio anubis
ENSPANG00000002974
I
ENSPANG00000007537
Papio anubis
ENSPANG00000007537
I
ENSPANG00000019646
Papio anubis
ENSPANG00000019646
I
CEBPE
Procavia capensis
ENSPCAG00000015039
I
ENSPFOG00000019930
Poecilia formosa
ENSPFOG00000019930
I
ENSPPYG00000005659
Pongo abelii
ENSPPYG00000005659
I
ENSPPYG00000011124
Pongo abelii
ENSPPYG00000011124
I
ENSPSIG00000000363
Pelodiscus sinensis
ENSPSIG00000000363
I
CEBPE
Pan troglodytes
ENSPTRG00000006162
I
CEBPA
Pan troglodytes
ENSPTRG00000038687
I
CEBPB
Pan troglodytes
ENSPTRG00000041263
I
CEBPB
Pteropus vampyrus
ENSPVAG00000003541
I
Cebpa
Rattus norvegicus
ENSRNOG00000010918
I
Cebpe
Rattus norvegicus
ENSRNOG00000014282
I
Cebpb
Rattus norvegicus
ENSRNOG00000057347
I
ENSSHAG00000013989
Sarcophilus harrisii
ENSSHAG00000013989
I
ENSSHAG00000014918
Sarcophilus harrisii
ENSSHAG00000014918
I
CEBPE
Sus scrofa
ENSSSCG00000002033
I
CEBPA
Sus scrofa
ENSSSCG00000002866
I
ENSSSCG00000024816
Sus scrofa
ENSSSCG00000024816
I
ENSSSCG00000028739
Sus scrofa
ENSSSCG00000028739
I
ENSSTOG00000007204
Ictidomys tridecemlineatus
ENSSTOG00000007204
I
ENSTBEG00000017246
Tupaia belangeri
ENSTBEG00000017246
I
CEBPB
Taeniopygia guttata
ENSTGUG00000008707
I
CEBPA
Taeniopygia guttata
ENSTGUG00000009472
I
cebpa
Tetraodon nigroviridis
ENSTNIG00000003102
I
cebpa
Takifugu rubripes
ENSTRUG00000006383
I
CEBPB
Tursiops truncatus
ENSTTRG00000003985
I
CEBPE
Tursiops truncatus
ENSTTRG00000017229
I
ENSXMAG00000019692
Xiphophorus maculatus
ENSXMAG00000019692
I
GB44204
Apis mellifera
GB44204
I
HHAL004160-PA
Halyomorpha halys
HHAL004160-PA
I
L798_13978
Zootermopsis nevadensis
L798_13978
I
LDEC017703
Leptinotarsa decemlineata
LDEC017703
I
Myotis_brandtii_CEBPE_10009435
Myotis brandtii
Myotis_brandtii_CEBPE_10009435
I
NV14868
Nasonia vitripennis
NV14868
I
Ogr08265
Ophisaurus gracilis
Ogr08265
I
Ogr08532
Ophisaurus gracilis
Ogr08532
I
PHUM433250
Pediculus humanus
PHUM433250
I
Pvit_03335
Pogona vitticeps
Pvit_03335
I
SINV13631
Solenopsis invicta
SINV13631
I
TC009220
Tribolium castaneum
TC009220
I
cebpa.S
Xenopus laevis
XB-GENE-17335551
I
cebpb
Xenopus tropicalis
XB-GENE-479779
I
cebpa.L
Xenopus laevis
XB-GENE-855405
I
cebpb.L
Xenopus laevis
XB-GENE-865306
I
YQE_11799
Dendroctonus ponderosae
YQE_11799
I