CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DUXA
(
Oryctolagus cuniculus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSOCUG00000011331
T213155_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DUXA
M01247_2.00
Homo sapiens
NTGATTRNN
NNYAATCAN
PBM
Lambert et al.(2019)
pTH11226
0.779
0.867
DUXA
M03244_2.00
Homo sapiens
NHRAYBYAATCAN
NTGATTRVRTYDN
SELEX
Jolma et al.(2013)
DUXA_1
0.779
0.867
DUXA
M05402_2.00
Homo sapiens
TRAYBYAATCA
TGATTRVRTYA
SELEX
Yin et al.(2017)
DUXA_eDBD_HT-SELEX
0.779
0.867
DUXA
M10756_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DUXA_02
0.779
0.867
DUXA
M05403_2.00
Homo sapiens
YRAYBYAATCA
TGATTRVRTYR
SELEX
Yin et al.(2017)
DUXA_eDBD_Methyl-HT-SELEX
0.779
0.867
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000009749
Homeodomain
16
72
RRSRTRFTEEQLKILINAFNQKPYPGYATKQKLASEINTEESRIQVWFQNRRARHRF
ENSOCUP00000009749
Homeodomain
103
158
RRCRTNYSSSQLHTLIKAFMSNPYPGIDSREQLAKEIGVPESRIQIWFQNRRNRFN
Links
Other
Homeodomain
family TFs
Other
Oryctolagus cuniculus
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000004960
Ailuropoda melanoleuca
ENSAMEG00000004960
I
0.773
ENSBTAP00000049813-D1
Bos grunniens
ENSBTAP00000049813-D1
I
0.763
DUXA
Canis familiaris
ENSCAFG00000002431
I
0.778
ENSCJAG00000021948
Callithrix jacchus
ENSCJAG00000021948
I
0.697
ENSCJAG00000031259
Callithrix jacchus
ENSCJAG00000031259
I
0.697
ENSCJAG00000032154
Callithrix jacchus
ENSCJAG00000032154
I
0.697
ENSCSAG00000001657
Chlorocebus sabaeus
ENSCSAG00000001657
I
0.786
ENSDNOG00000025505
Dasypus novemcinctus
ENSDNOG00000025505
I
0.756
ENSDNOG00000046863
Dasypus novemcinctus
ENSDNOG00000046863
I
0.756
DUXA
Equus caballus
ENSECAG00000021112
I
0.796
DUXA
Felis catus
ENSFCAG00000007545
I
0.783
DUXA
Homo sapiens
ENSG00000258873
D
0.779
DUXA
Gorilla gorilla
ENSGGOG00000005650
I
0.779
DUXA
Loxodonta africana
ENSLAFG00000030167
I
0.718
ENSMEUG00000014608
Macropus eugenii
ENSMEUG00000014608
N
0.599
DUXA
Microcebus murinus
ENSMICG00000006042
I
0.774
ENSMICG00000006881
Microcebus murinus
ENSMICG00000006881
I
0.617
ENSMICG00000015060
Microcebus murinus
ENSMICG00000015060
I
0.617
DUXA
Macaca mulatta
ENSMMUG00000007788
I
0.786
ENSMMUP00000010232
Macaca fascicularis
ENSMMUP00000010232
I
0.786
ENSOARG00000003446
Ovis aries
ENSOARG00000003446
I
0.767
DUXA
Ochotona princeps
ENSOPRG00000000440
N
0.600
ENSPANG00000009357
Papio anubis
ENSPANG00000009357
I
0.786
ENSPPYG00000010457
Pongo abelii
ENSPPYG00000010457
I
0.779
DUXA
Pan troglodytes
ENSPTRG00000028871
I
0.779
DUXA
Tursiops truncatus
ENSTTRG00000014200
I
0.774
NEMVEDRAFT_v1g38792
Nematostella vectensis
NEMVEDRAFT_v1g38792
I
0.630
NEMVEDRAFT_v1g92436
Nematostella vectensis
NEMVEDRAFT_v1g92436
I
0.614
NEMVEDRAFT_v1g92500
Nematostella vectensis
NEMVEDRAFT_v1g92500
I
0.614