CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DMBX1
(
Procavia capensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSPCAG00000000286
T214193_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.809
0.644
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.809
0.644
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.809
0.644
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.809
0.644
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.809
0.644
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.809
0.644
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.809
0.644
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.809
0.644
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.809
0.644
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.742
0.422
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.742
0.422
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.742
0.422
Dmbx1
M00441_2.00
Mus musculus
NTAATCYNN
NNRGATTAN
PBM
Berger et al.(2008)
Dmbx1_2277
0.360
1.000
DMBX1
M03236_2.00
Homo sapiens
NHTAATCCBN
NVGGATTADN
SELEX
Jolma et al.(2013)
DMBX1_1
0.360
1.000
DMBX1
M05383_2.00
Homo sapiens
NTAATCSN
NSGATTAN
SELEX
Yin et al.(2017)
DMBX1_eDBD_HT-SELEX
0.360
1.000
DMBX1
M05384_2.00
Homo sapiens
HTAATCCN
NGGATTAD
SELEX
Yin et al.(2017)
DMBX1_eDBD_Methyl-HT-SELEX
0.360
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000000263
Homeodomain
67
112
RRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQX
Links
Other
Homeodomain
family TFs
Other
Procavia capensis
TFs
1247 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB00149.1
Alternaria brassicicola
AB00149.1
I
0.000
ACRE_076520
Acremonium chrysogenum
ACRE_076520
I
0.000
BBA_03262
Beauveria bassiana
BBA_03262
I
0.000
Bcin08g03550
Botrytis cinerea
Bcin08g03550
I
0.000
BDDG_01946
Blastomyces dermatitidis
BDDG_01946
I
0.000
BGHDH14_bgh04658
Blumeria graminis
BGHDH14_bgh04658
I
0.000
ACLA_091820
Aspergillus clavatus
CADACLAG00008439
I
0.000
AFUA_2G03020
Aspergillus fumigatus
CADAFUAG00003420
I
0.000
ANIA_04524
Aspergillus nidulans
CADANIAG00005916
D
0.000
CADAORAG00008664
Aspergillus oryzae
CADAORAG00008664
I
0.000
NFIA_035370
Neosartorya fischeri
CADNFIAG00003845
I
0.000
CCM_01606
Cordyceps militaris
CCM_01606
I
0.000
CFIO01_13556
Colletotrichum fioriniae
CFIO01_13556
I
0.000
CGGC5_5234
Colletotrichum gloeosporioides
CGGC5_5234
I
0.000
CH063_08705
Colletotrichum higginsianum
CH063_08705
I
0.000
CHGG_05536
Chaetomium globosum
CHGG_05536
I
0.000
CIMG_04575
Coccidioides immitis
CIMG_04575
I
0.000
Cob_12050
Colletotrichum orbiculare
Cob_12050
I
0.000
CPC735_072160
Coccidioides posadasii
CPC735_072160
I
0.000
CPUR_06379
Claviceps purpurea
CPUR_06379
I
0.000
CSUB01_05543
Colletotrichum sublineola
CSUB01_05543
I
0.000
CTHT_0071270
Chaetomium thermophilum
CTHT_0071270
I
0.000
EPUS_02974
Endocarpon pusillum
EPUS_02974
I
0.000
estExt_fgenesh1_pg.C_10925
Cryphonectria parasitica
estExt_fgenesh1_pg.C_10925
I
0.000
EV44_g5855
Erysiphe necator
EV44_g5855
I
0.000
e_gw1.00009.336.1
Aspergillus carbonarius
e_gw1.00009.336.1
I
0.000
F503_08470
Ophiostoma piceae uamh
F503_08470
I
0.000
FFUJ_07927
Fusarium fujikuroi
FFUJ_07927
I
0.000
fgenesh1_pg.sca_20_chr6_4_0000490
Nectria haematococca
fgenesh1_pg.sca_20_chr6_4_0000490
I
0.000
FGRRES_02538
Fusarium graminearum
FGRRES_02538
I
0.000
FOXG_10566
Fusarium oxysporum
FOXG_10566
I
0.000
FPSE_08658
Fusarium pseudograminearum
FPSE_08658
I
0.000
FVEG_09213
Fusarium verticillioides
FVEG_09213
I
0.000
GGTG_01117
Gaeumannomyces graminis
GGTG_01117
I
0.000
GLRG_00217
Colletotrichum graminicola
GLRG_00217
I
0.000
GMDG_07087
Pseudogymnoascus destructans
GMDG_07087
I
0.000
GSTUM_00007236001
Tuber melanosporum
GSTUM_00007236001
I
0.000
H072_4198
Dactylellina haptotyla
H072_4198
I
0.000
H101_05733
Trichophyton interdigitale
H101_05733
I
0.000
HCBG_00496
Histoplasma capsulatum
HCBG_00496
I
0.000
HMPREF1624_06657
Sporothrix schenckii
HMPREF1624_06657
I
0.000
LEMA_P069020.1
Leptosphaeria maculans
LEMA_P069020.1
I
0.000
M7I_1326
Glarea lozoyensis
M7I_1326
I
0.000
MAC_04099
Metarhizium acridum
MAC_04099
I
0.000
MAJ_06385
Metarhizium majus
MAJ_06385
I
0.000
MAM_04656
Metarhizium album
MAM_04656
I
0.000
MANI_003859
Metarhizium anisopliae
MANI_003859
I
0.000
MAPG_08138
Magnaporthe poae
MAPG_08138
I
0.000
MBM_01938
Marssonina brunnea
MBM_01938
I
0.000
MBR_05419
Metarhizium brunneum
MBR_05419
I
0.000
MCYG_05889
Microsporum canis
MCYG_05889
I
0.000
MCYG_05889
Arthroderma otae
MCYG_05889
I
0.000
MGG_05240
Magnaporthe oryzae
MGG_05240
I
0.000
MGU_05479
Metarhizium guizhouense
MGU_05479
I
0.000
MGYG_06082
Microsporum gypseum
MGYG_06082
I
0.000
MPH_09871
Macrophomina phaseolina
MPH_09871
I
0.000
MYCTH_50303
Myceliophthora thermophila
MYCTH_50303
I
0.000
NCU07834
Neurospora crassa
NCU07834
D
0.000
NechaG81864
Fusarium solani
NechaG81864
I
0.000
NEUTE1DRAFT_80911
Neurospora tetrasperma
NEUTE1DRAFT_80911
I
0.000
OCS_06863
Ophiocordyceps sinensis
OCS_06863
I
0.000
OIDMADRAFT_26900
Oidiodendron maius
OIDMADRAFT_26900
I
0.000
PAAG_06795
Paracoccidioides sp lutzii
PAAG_06795
I
0.000
PABG_01081
Paracoccidioides brasiliensis
PABG_01081
I
0.000
PDE_05251
Penicillium oxalicum
PDE_05251
I
0.000
PFICI_05808
Pestalotiopsis fici
PFICI_05808
I
0.000
PMAA_055660
Penicillium marneffei
PMAA_055660
I
0.000
PMAA_055660
Talaromyces marneffei
PMAA_055660
I
0.000
PTRG_10693
Pyrenophora triticirepentis
PTRG_10693
I
0.000
PTT_08996
Pyrenophora teres
PTT_08996
I
0.000
PVAR5_1965
Byssochlamys spectabilis
PVAR5_1965
I
0.000
S40285_00496
Stachybotrys chlorohalonata
S40285_00496
I
0.000
SAPIO_CDS7771
Scedosporium apiospermum
SAPIO_CDS7771
I
0.000
SBOR_1213
Sclerotinia borealis
SBOR_1213
I
0.000
SMAC_02112
Sordaria macrospora
SMAC_02112
I
0.000
SNOG_09800
Phaeosphaeria nodorum
SNOG_09800
I
0.000
SNOG_09800
Stagonospora nodorum
SNOG_09800
I
0.000
SPBR_00477
Sporothrix brasiliensis
SPBR_00477
I
0.000
SS1G_03205
Sclerotinia sclerotiorum
SS1G_03205
I
0.000
TEQG_06366
Trichophyton equinum
TEQG_06366
I
0.000
TSTA_016710
Talaromyces stipitatus
TSTA_016710
I
0.000
UCRNP2_4750
Neofusicoccum parvum
UCRNP2_4750
I
0.000
UV8b_3847
Ustilaginoidea virens
UV8b_3847
I
0.000
V499_03771
Pseudogymnoascus pannorum
V499_03771
I
0.000
VDAG_10303
Verticillium dahliae
VDAG_10303
I
0.000
VHEMI02782
Torrubiella hemipterigena
VHEMI02782
I
0.000
X797_009564
Metarhizium robertsii
X797_009564
I
0.000