CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPMAG00000002391
(
Petromyzon marinus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSPMAG00000002391
T214589_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Irx2
M00386_2.00
Mus musculus
NNDACAHNN
NNDTGTHNN
PBM
Berger et al.(2008)
Irx2_0900
0.856
0.965
Irx5
M00455_2.00
Mus musculus
NNNDACAHN
NDTGTHNNN
PBM
Berger et al.(2008)
Irx5_2385
0.856
0.965
IRX2
M03212_2.00
Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX2_1
0.856
0.965
IRX5
M03222_2.00
Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX5_1
0.856
0.965
IRX5
M05315_2.00
Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN
SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX
0.856
0.965
IRX5
M05316_2.00
Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW
SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX
0.856
0.965
ara
M06518_2.00
Drosophila melanogaster
WWACA
TGTWW
B1H
Mathelier et al.(2014)
MA0210.1
0.813
0.912
ara
M06313_2.00
Drosophila melanogaster
TGTWWWNN
NNWWWACA
B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904
0.813
0.912
ara
M06314_2.00
Drosophila melanogaster
DWWACA
TGTWWH
B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904
0.813
0.912
caup
M06519_2.00
Drosophila melanogaster
WAACA
TGTTW
B1H
Mathelier et al.(2014)
MA0217.1
0.804
0.860
caup
M06315_2.00
Drosophila melanogaster
HWDWAACA
TGTTWHWD
B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919
0.804
0.860
caup
M06316_2.00
Drosophila melanogaster
NDDACA
TGTHHN
B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919
0.804
0.860
Irx4
M00416_2.00
Mus musculus
NNNDAMAH
DTKTHNNN
PBM
Berger et al.(2008)
Irx4_2242
0.778
0.860
Irx6
M00456_2.00
Mus musculus
NNDAHWN
NWDTHNN
PBM
Berger et al.(2008)
Irx6_2623
0.778
0.842
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPMAP00000002608
Homeodomain
38
97
PAFRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKK
Links
Other
Homeodomain
family TFs
Other
Petromyzon marinus
TFs
379 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O5_10470
Cladophialophora psammophila
A1O5_10470
I
AB05384.1
Alternaria brassicicola
AB05384.1
I
AOL_s00097g585
Arthrobotrys oligospora
AOL_s00097g585
I
ARB_02172
Arthroderma benhamiae
ARB_02172
I
AUEXF2481DRAFT_6481
Aureobasidium subglaciale
AUEXF2481DRAFT_6481
I
Bcin03g00750
Botrytis cinerea
Bcin03g00750
I
BDDG_03512
Blastomyces dermatitidis
BDDG_03512
I
BGHDH14_bgh02790
Blumeria graminis
BGHDH14_bgh02790
I
ACLA_019130
Aspergillus clavatus
CADACLAG00002921
I
CADAFLAG00001090
Aspergillus flavus
CADAFLAG00001090
I
AFUA_1G16460
Aspergillus fumigatus
CADAFUAG00007656
I
CADANGAG00001076
Aspergillus niger
CADANGAG00001076
I
ANIA_00951
Aspergillus nidulans
CADANIAG00001701
D
ATEG_05161
Aspergillus terreus
CADATEAG00004745
I
NFIA_008980
Neosartorya fischeri
CADNFIAG00001347
I
CFIO01_07721
Colletotrichum fioriniae
CFIO01_07721
I
CGGC5_4259
Colletotrichum gloeosporioides
CGGC5_4259
I
CIMG_13671
Coccidioides immitis
CIMG_13671
I
CMQ_6538
Grosmannia clavigera
CMQ_6538
I
Cob_11342
Colletotrichum orbiculare
Cob_11342
I
COCC4DRAFT_52892
Bipolaris maydis
COCC4DRAFT_52892
I
COCCADRAFT_202
Bipolaris zeicola
COCCADRAFT_202
I
COCMIDRAFT_22848
Bipolaris oryzae
COCMIDRAFT_22848
I
COCSADRAFT_34697
Bipolaris sorokiniana
COCSADRAFT_34697
I
COCVIDRAFT_24689
Bipolaris victoriae
COCVIDRAFT_24689
I
CPC735_010880
Coccidioides posadasii
CPC735_010880
I
CPUR_06646
Claviceps purpurea
CPUR_06646
I
CSUB01_10111
Colletotrichum sublineola
CSUB01_10111
I
estExt_fgenesh1_pg.C_80141
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_80141
I
estExt_fgenesh1_pg.C_chr_20607
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_20607
I
estExt_Genewise1Plus.C_21231
Cryphonectria parasitica
estExt_Genewise1Plus.C_21231
I
estExt_Genewise1Plus.C_sca_8_chr1_1_00454
Nectria haematococca
estExt_Genewise1Plus.C_sca_8_chr1_1_00454
I
EURHEDRAFT_512193
Aspergillus ruber
EURHEDRAFT_512193
I
EV44_g5365
Erysiphe necator
EV44_g5365
I
e_gw1.00042.98.1
Aspergillus carbonarius
e_gw1.00042.98.1
I
F503_00378
Ophiostoma piceae uamh
F503_00378
I
FFUJ_01766
Fusarium fujikuroi
FFUJ_01766
I
FGRRES_01555
Fusarium graminearum
FGRRES_01555
I
FOXG_11153
Fusarium oxysporum
FOXG_11153
I
FPSE_00779
Fusarium pseudograminearum
FPSE_00779
I
FVEG_09636
Fusarium verticillioides
FVEG_09636
I
GGTG_06418
Gaeumannomyces graminis
GGTG_06418
I
GLRG_10296
Colletotrichum graminicola
GLRG_10296
I
GMDG_00083
Pseudogymnoascus destructans
GMDG_00083
I
GSTUM_00008508001
Tuber melanosporum
GSTUM_00008508001
I
H072_2778
Dactylellina haptotyla
H072_2778
I
H101_07555
Trichophyton interdigitale
H101_07555
I
H102_00527
Trichophyton rubrum
H102_00527
I
H105_00515
Trichophyton soudanense
H105_00515
I
HCBG_01276
Histoplasma capsulatum
HCBG_01276
I
HMPREF1624_07934
Sporothrix schenckii
HMPREF1624_07934
I
LEMA_P086810.1
Leptosphaeria maculans
LEMA_P086810.1
I
M437DRAFT_37789
Aureobasidium melanogenum
M437DRAFT_37789
I
M438DRAFT_349765
Aureobasidium pullulans
M438DRAFT_349765
I
M7I_0147
Glarea lozoyensis
M7I_0147
I
MAJ_06048
Metarhizium majus
MAJ_06048
I
MAM_04081
Metarhizium album
MAM_04081
I
MAPG_04630
Magnaporthe poae
MAPG_04630
I
MBM_01879
Marssonina brunnea
MBM_01879
I
MBR_06810
Metarhizium brunneum
MBR_06810
I
MCYG_00012
Microsporum canis
MCYG_00012
I
MCYG_00012
Arthroderma otae
MCYG_00012
I
MGG_03288
Magnaporthe oryzae
MGG_03288
I
MGU_04555
Metarhizium guizhouense
MGU_04555
I
MGYG_07213
Microsporum gypseum
MGYG_07213
I
MPH_10251
Macrophomina phaseolina
MPH_10251
I
Mycgr3G108163
Zymoseptoria tritici
Mycgr3G108163
I
NechaG65174
Fusarium solani
NechaG65174
I
OCS_04625
Ophiocordyceps sinensis
OCS_04625
I
OIDMADRAFT_183172
Oidiodendron maius
OIDMADRAFT_183172
I
PAAG_12580
Paracoccidioides sp lutzii
PAAG_12580
I
PABG_06099
Paracoccidioides brasiliensis
PABG_06099
I
Pc21g23040
Penicillium chrysogenum
Pc21g23040
I
PCH_Pc21g23040
Penicillium rubens
PCH_Pc21g23040
I
PDE_00114
Penicillium oxalicum
PDE_00114
I
PDIP_11330
Penicillium digitatum
PDIP_11330
I
PEX1_102500
Penicillium expansum
PEX1_102500
I
PFICI_09118
Pestalotiopsis fici
PFICI_09118
I
PITC_032250
Penicillium italicum
PITC_032250
I
PMAA_066500
Talaromyces marneffei
PMAA_066500
I
PMAA_066500
Penicillium marneffei
PMAA_066500
I
PODANS_3_9690
Podospora anserina
PODANS_3_9690
I
PTT_17883
Pyrenophora teres
PTT_17883
I
PV05_07253
Exophiala xenobiotica
PV05_07253
I
PV06_04889
Exophiala oligosperma
PV06_04889
I
PV08_03184
Exophiala spinifera
PV08_03184
I
PV09_04179
Verruconis gallopava
PV09_04179
I
PV10_00861
Exophiala mesophila
PV10_00861
I
PV11_03612
Exophiala sideris
PV11_03612
I
PVAR5_7895
Byssochlamys spectabilis
PVAR5_7895
I
S40285_02659
Stachybotrys chlorohalonata
S40285_02659
I
S40288_02068
Stachybotrys chartarum
S40288_02068
I
SAPIO_CDS1137
Scedosporium apiospermum
SAPIO_CDS1137
I
SBOR_3479
Sclerotinia borealis
SBOR_3479
I
SETTUDRAFT_163914
Setosphaeria turcica
SETTUDRAFT_163914
I
SNOG_02426
Stagonospora nodorum
SNOG_02426
I
SNOG_02426
Phaeosphaeria nodorum
SNOG_02426
I
SPBR_00337
Sporothrix brasiliensis
SPBR_00337
I
SS1G_00829
Sclerotinia sclerotiorum
SS1G_00829
I
TEQG_08786
Trichophyton equinum
TEQG_08786
I
TRIATDRAFT_141284
Trichoderma atroviride
TRIATDRAFT_141284
I
TRIREDRAFT_22532
Trichoderma reesei
TRIREDRAFT_22532
I
TRIVIDRAFT_2765
Trichoderma virens
TRIVIDRAFT_2765
I
TRV_00423
Trichophyton verrucosum
TRV_00423
I
TSTA_086630
Talaromyces stipitatus
TSTA_086630
I
U727_00433202531
Penicillium solitum
U727_00433202531
I
UCRNP2_8340
Neofusicoccum parvum
UCRNP2_8340
I
UCRPA7_8182
Togninia minima
UCRPA7_8182
I
UREG_02910
Uncinocarpus reesii
UREG_02910
I
UV8b_475
Ustilaginoidea virens
UV8b_475
I
V499_07882
Pseudogymnoascus pannorum
V499_07882
I
VDAG_07716
Verticillium dahliae
VDAG_07716
I
VDBG_05782
Verticillium albo atrum
VDBG_05782
I
VDBG_05782
Verticillium alfalfae
VDBG_05782
I
X797_000031
Metarhizium robertsii
X797_000031
I