CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DUXA
(
Pan troglodytes
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSPTRG00000028871
T215147_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DUXA
M01247_2.00
Homo sapiens
NTGATTRNN
NNYAATCAN
PBM
Lambert et al.(2019)
pTH11226
0.867
1.000
DUXA
M03244_2.00
Homo sapiens
NHRAYBYAATCAN
NTGATTRVRTYDN
SELEX
Jolma et al.(2013)
DUXA_1
0.867
1.000
DUXA
M05402_2.00
Homo sapiens
TRAYBYAATCA
TGATTRVRTYA
SELEX
Yin et al.(2017)
DUXA_eDBD_HT-SELEX
0.867
1.000
DUXA
M10756_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DUXA_02
0.867
1.000
DUXA
M05403_2.00
Homo sapiens
YRAYBYAATCA
TGATTRVRTYR
SELEX
Yin et al.(2017)
DUXA_eDBD_Methyl-HT-SELEX
0.867
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000048471
Homeodomain
16
70
RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARH
ENSPTRP00000048471
Homeodomain
102
156
RRCRTTYSASQLHTLIKAFMKNPYPGIDSREELAKEIGVPESRVQIWFQNRRSRL
Links
Other
Homeodomain
family TFs
Other
Pan troglodytes
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10007016
Chelonia mydas
Cmyd_10007016
I
ENSAMEG00000017605
Ailuropoda melanoleuca
ENSAMEG00000017605
I
POU4F3
Bos taurus
ENSBTAG00000018817
I
POU4F3
Canis familiaris
ENSCAFG00000006473
I
POU4F3
Callithrix jacchus
ENSCJAG00000021307
I
POU4F3
Cavia porcellus
ENSCPOG00000025610
I
ENSCSAG00000012256
Chlorocebus sabaeus
ENSCSAG00000012256
I
POU4F3
Dasypus novemcinctus
ENSDNOG00000045606
I
Pou4f3
Dipodomys ordii
ENSDORG00000002965
I
POU4F3
Equus caballus
ENSECAG00000018410
I
POU4F3
Erinaceus europaeus
ENSEEUG00000012660
I
POU4F3
Echinops telfairi
ENSETEG00000006520
I
POU4F3
Felis catus
ENSFCAG00000030722
I
POU4F3
Homo sapiens
ENSG00000091010
D
POU4F3
Gorilla gorilla
ENSGGOG00000012435
I
ENSLACG00000008349
Latimeria chalumnae
ENSLACG00000008349
I
POU4F3
Loxodonta africana
ENSLAFG00000006932
I
ENSMEUG00000009050
Macropus eugenii
ENSMEUG00000009050
I
ENSMMUG00000022320
Macaca mulatta
ENSMMUG00000022320
I
POU4F3
Monodelphis domestica
ENSMODG00000010137
I
ENSMPUG00000007828
Mustela putorius furo
ENSMPUG00000007828
I
Pou4f3
Mus musculus
ENSMUSG00000024497
D
ENSNLEG00000009898
Nomascus leucogenys
ENSNLEG00000009898
I
ENSOARG00000003067
Ovis aries
ENSOARG00000003067
I
ENSOCUG00000022425
Oryctolagus cuniculus
ENSOCUG00000022425
I
POU4F3
Otolemur garnettii
ENSOGAG00000026756
I
ENSP00000230732
Macaca fascicularis
ENSP00000230732
I
ENSP00000230732-D1
Bos grunniens
ENSP00000230732-D1
I
ENSPANG00000008306
Papio anubis
ENSPANG00000008306
I
ENSPFOG00000003289
Poecilia formosa
ENSPFOG00000003289
I
ENSPPYG00000015910
Pongo abelii
ENSPPYG00000015910
I
ENSPSIG00000016096
Pelodiscus sinensis
ENSPSIG00000016096
I
POU4F3
Pan troglodytes
ENSPTRG00000017374
I
POU4F3
Pteropus vampyrus
ENSPVAG00000005224
I
Pou4f3
Rattus norvegicus
ENSRNOG00000018842
I
ENSSHAG00000008089
Sarcophilus harrisii
ENSSHAG00000008089
I
POU4F3
Sus scrofa
ENSSSCG00000014412
I
ENSSTOG00000021302
Ictidomys tridecemlineatus
ENSSTOG00000021302
I
POU4F3
Tupaia belangeri
ENSTBEG00000014805
I
POU4F3
Tursiops truncatus
ENSTTRG00000000937
I
ENSXMAG00000001410
Xiphophorus maculatus
ENSXMAG00000001410
I
Myotis_brandtii_POU4F3_10017427
Myotis brandtii
Myotis_brandtii_POU4F3_10017427
I