DBX1 (Tetraodon nigroviridis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTNIG00000004855 T216428_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Dbx1
M00451_2.00 		Mus musculus
WTTAATTA
TAATTAAW		 PBM
Berger et al.(2008)
Dbx1_3486 		0.865 0.911
Dbx2
M00499_2.00 		Mus musculus
NNDTNNN
NNNAHNN		 PBM
Berger et al.(2008)
Dbx2_3487 		0.829 0.804
Dbx
M02128_2.00 		Drosophila melanogaster
WTTAATTA
TAATTAAW		 PBM
Weirauch et al.(2014)
pTH6051 		0.816 0.821
Dbx
M06550_2.00 		Drosophila melanogaster
TTWATKA
TMATWAA		 B1H
Mathelier et al.(2014)
MA0174.1 		0.816 0.821
Hlx
M00485_2.00 		Mus musculus
NNNAWND
HNWTNNN		 PBM
Berger et al.(2008)
Hlx1_2350 		0.732 0.661
H2.0
M06489_2.00 		Drosophila melanogaster
WTWATDA
THATWAW		 B1H
Mathelier et al.(2014)
MA0448.1 		0.731 0.679
H2.0
M06250_2.00 		Drosophila melanogaster
TWWWWDA
THAWWWA		 B1H
Zhu et al.(2011)
H2.0_Cell_FBgn0001170 		0.731 0.679
H2.0
M06251_2.00 		Drosophila melanogaster
WTWATTRN
NYAATWAW		 B1H
Zhu et al.(2011)
H2.0_SOLEXA_FBgn0001170 		0.731 0.679
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000007515 Homeodomain 179 234

Links

Other Homeodomain family TFs
Other Tetraodon nigroviridis TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZFP28 Bos taurus ENSBTAG00000002055 N
ENSBTAP00000021794-D1 Bos grunniens ENSBTAP00000021794-D1 N
ZFP28 Canis familiaris ENSCAFG00000024289 I
ZFP28 Callithrix jacchus ENSCJAG00000020297 I
ENSCSAG00000001666 Chlorocebus sabaeus ENSCSAG00000001666 I
ZFP28 Dasypus novemcinctus ENSDNOG00000007010 I
ZFP28 Equus caballus ENSECAG00000013849 I
ZFP28 Echinops telfairi ENSETEG00000002303 I
ZFP28 Homo sapiens ENSG00000196867 D
ZFP28 Gorilla gorilla ENSGGOG00000011352 I
ZFP28 Loxodonta africana ENSLAFG00000010041 I
ZFP28 Macaca mulatta ENSMMUG00000021673 I
ENSMPUG00000006646 Mustela putorius furo ENSMPUG00000006646 I
Zfp28 Mus musculus ENSMUSG00000062861 N
ENSNLEG00000010865 Nomascus leucogenys ENSNLEG00000010865 I
ZFP28 Otolemur garnettii ENSOGAG00000004896 I
ZFP28 Ochotona princeps ENSOPRG00000014306 I
ENSP00000301318 Macaca fascicularis ENSP00000301318 I
ENSPANG00000008416 Papio anubis ENSPANG00000008416 I
ENSPPYG00000010451 Pongo abelii ENSPPYG00000010451 I
ZFP28 Pan troglodytes ENSPTRG00000023421 I
ZFP28 Sus scrofa ENSSSCG00000027774 I
ENSSTOG00000022134 Ictidomys tridecemlineatus ENSSTOG00000022134 I