GB51292 (Apis mellifera)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GB51292 T218633_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hoxa7
M00476_2.00
Mus musculus
NNWAYNDNN

NNHNRTWNN
PBM
Berger et al.(2008)
Hoxa7_2668
0.862 0.982
Hoxa7
M00477_2.00
Mus musculus
NYHHYNNNN

NNNNRDDRN
PBM
Berger et al.(2008)
Hoxa7_3750
0.862 0.982
HOXA7
M05069_2.00
Homo sapiens
NTAATKRV

BYMATTAN
SELEX
Yin et al.(2017)
HOXA7_eDBD_HT-SELEX
0.862 0.982
Antp
M06549_2.00
Drosophila melanogaster
TTAATKA

TMATTAA
B1H
Mathelier et al.(2014)
MA0166.1
0.862 0.982
Antp
M06374_2.00
Drosophila melanogaster
YTTAATKA

TMATTAAR
B1H
Zhu et al.(2011)
Antp_Cell_FBgn0000095
0.862 0.982
Antp
M06375_2.00
Drosophila melanogaster
WTAATW

AATTAW
B1H
Zhu et al.(2011)
Antp_FlyReg_FBgn0000095
0.862 0.982
Antp
M06376_2.00
Drosophila melanogaster
NHTAATKR

YMATTADN
B1H
Zhu et al.(2011)
Antp_SOLEXA_FBgn0000095
0.862 0.982
Antp
M09682_2.00
Drosophila melanogaster
TYTTWATKA

TMATWAARA
Misc
Kulakovskiy et al.(2009)
Antp
0.862 0.982
Antp
M10789_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$ANTP_Q6_01
0.862 0.982
HOXA7
M10679_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA7_01
0.862 0.982
HOXA7
M05070_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_1
0.862 0.982
HOXA7
M05071_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_2
0.862 0.982
HOXB7
M00334_2.00
Homo sapiens
NBRDNNN

NNNHYVN
PBM
Barrera et al.(2016)
HOXB7_REF
0.855 0.982
Hoxb7
M00481_2.00
Mus musculus
NNWAYNDN

NHNRTWNN
PBM
Berger et al.(2008)
Hoxb7_3953
0.855 0.982
HOXB7
M05404_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
HOXB7_eDBD_HT-SELEX
0.855 0.982
HOXB7
M05407_2.00
Homo sapiens
BBTAATTRCN

NGYAATTAVV
SELEX
Yin et al.(2017)
HOXB7_FL_HT-SELEX
0.855 0.982
HOXB7
M09166_2.00
Homo sapiens
MATHAATCAW

WTGATTDATK
Misc
Kulakovskiy et al.(2013)
HXB7_HUMAN.H11MO.0.C
0.855 0.982
Hoxb7
M09206_2.00
Mus musculus
MATHAATCAW

WTGATTDATK
Misc
Kulakovskiy et al.(2013)
HXB7_MOUSE.H11MO.0.C
0.855 0.982
HOXB7
M05405_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_1
0.855 0.982
HOXB7
M05406_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_2
0.855 0.982
HOXB7
M05408_2.00
Homo sapiens
NNTAATKRCN

NGYMATTANN
SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_1
0.855 0.982
HOXB7
M05409_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_2
0.855 0.982
HOXB7
M00333_2.00
Homo sapiens
NHATWTATTN

NAATAWATDN
PBM
Barrera et al.(2016)
HOXB7_R189C
0.855 0.965
ftz
M03795_2.00
Drosophila melanogaster
WTAATTRC

GYAATTAW
SELEX
Nitta et al.(2015)
ftz_1
0.836 0.860
ftz
M06488_2.00
Drosophila melanogaster
TTAATKA

TMATTAA
B1H
Mathelier et al.(2014)
MA0225.1
0.836 0.860
ftz
M06247_2.00
Drosophila melanogaster
VTTAATKA

TMATTAAB
B1H
Zhu et al.(2011)
Ftz_Cell_FBgn0001077
0.836 0.860
ftz
M06248_2.00
Drosophila melanogaster
TAATKRNH

DNYMATTA
B1H
Zhu et al.(2011)
ftz_FlyReg_FBgn0001077
0.836 0.860
ftz
M06249_2.00
Drosophila melanogaster
BTAATKA

TMATTAV
B1H
Zhu et al.(2011)
Ftz_SOLEXA_FBgn0001077
0.836 0.860
ftz
M09679_2.00
Drosophila melanogaster
YTAATKRNN

NNYMATTAR
Misc
Kulakovskiy et al.(2009)
ftz
0.836 0.860
ftz
M10787_2.00
Drosophila melanogaster
CTTAATTRBHBB

VVDVYAATTAAG
Transfac
Matys et al.(2006)
I$FTZ_01
0.836 0.860
Hoxb6
M00381_2.00
Mus musculus
NNDHNNN

NNNDHNN
PBM
Berger et al.(2008)
Hoxb6_3428
0.835 0.982
HOXB6
M04999_2.00
Homo sapiens
NTAATKRY

RYMATTAN
SELEX
Yin et al.(2017)
HOXB6_eDBD_HT-SELEX
0.835 0.982
HOXB6
M05000_2.00
Homo sapiens
HTAAYGAY

RTCRTTAD
SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_1
0.835 0.982
HOXB6
M05001_2.00
Homo sapiens
NTWATKRB

VYMATWAN
SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_2
0.835 0.982
Hoxa6
M00494_2.00
Mus musculus
NWWATKRNN

NNYMATWWN
PBM
Berger et al.(2008)
Hoxa6_1040
0.831 0.947
HOXA6
M04974_2.00
Homo sapiens
NNTAATKRVN

NBYMATTANN
SELEX
Yin et al.(2017)
HOXA6_eDBD_HT-SELEX
0.831 0.947
HOXA6
M04975_2.00
Homo sapiens
NNTAATKRBN

NVYMATTANN
SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_1
0.831 0.947
HOXA6
M04976_2.00
Homo sapiens
NTAAYGRY

RYCRTTAN
SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_2
0.831 0.947
CBG00029
M01240_2.00
Caenorhabditis briggsae
ATTAATTA

TAATTAAT
PBM
Lambert et al.(2019)
pTH11471
0.822 0.772
Hoxc6
M00392_2.00
Mus musculus
TTAATTAB

VTAATTAA
PBM
Berger et al.(2008)
Hoxc6_3954
0.818 0.912
Hoxb8
M00517_2.00
Mus musculus
NWWAYNDNN

NNHNRTWWN
PBM
Berger et al.(2008)
Hoxb8_3780
0.817 0.825
HOXB8
M05048_2.00
Homo sapiens
NTAATKRM

KYMATTAN
SELEX
Yin et al.(2017)
HOXB8_eDBD_HT-SELEX
0.817 0.825
HOXB8
M09141_2.00
Homo sapiens
BMATHAATCAA

TTGATTDATKV
Misc
Kulakovskiy et al.(2013)
HXB8_HUMAN.H11MO.0.C
0.817 0.825
Hoxb8
M09214_2.00
Mus musculus
BMATHAATCAA

TTGATTDATKV
Misc
Kulakovskiy et al.(2013)
HXB8_MOUSE.H11MO.0.C
0.817 0.825
HOXB8
M05049_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_1
0.817 0.825
HOXB8
M05050_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_2
0.817 0.825
HOXD8
M03221_2.00
Homo sapiens
VHWAATKWDN

NHWMATTWDB
SELEX
Jolma et al.(2013)
HOXD8_1
0.817 0.807
HOXD8
M05310_2.00
Homo sapiens
BTAATKRY

RYMATTAV
SELEX
Yin et al.(2017)
HOXD8_eDBD_HT-SELEX
0.817 0.807
HOXD8
M05311_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_1
0.817 0.807
HOXD8
M05312_2.00
Homo sapiens
NTWAYGRY

RYCRTWAN
SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_2
0.817 0.807
abd-A
M03770_2.00
Drosophila melanogaster
NNTAATKRCN

NGYMATTANN
SELEX
Nitta et al.(2015)
abd-A_1
0.810 0.912
abd-A
M03771_2.00
Drosophila melanogaster
NNTAATKRCN

NGYMATTANN
SELEX
Nitta et al.(2015)
abd-A_2
0.810 0.912
abd-A
M06475_2.00
Drosophila melanogaster
TTAATKA

TMATTAA
B1H
Mathelier et al.(2014)
MA0206.1
0.810 0.912
abd-A
M06210_2.00
Drosophila melanogaster
WTWATKDM

KHMATWAW
B1H
Zhu et al.(2011)
Abd-A_FlyReg_FBgn0000014
0.810 0.912
abd-A
M09671_2.00
Drosophila melanogaster
HTAATKRH

DYMATTAD
Misc
Kulakovskiy et al.(2009)
abd-A
0.810 0.912
abd-A
M10778_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$ABDA_Q6
0.810 0.912
Ubx
M00558_2.00
Drosophila melanogaster
NWWAYDDNN

NNHHRTWWN
PBM
Busser et al.(2012a)
Ubx
0.805 0.912
Ubx
M03804_2.00
Drosophila melanogaster
NTAATKRH

DYMATTAN
SELEX
Nitta et al.(2015)
Ubx_1
0.805 0.912
Ubx
M06499_2.00
Drosophila melanogaster
NTTAATKR

YMATTAAN
B1H
Mathelier et al.(2014)
MA0094.2
0.805 0.912
Ubx
M06273_2.00
Drosophila melanogaster
NTTAATKR

YMATTAAN
B1H
Zhu et al.(2011)
Ubx_Cell_FBgn0003944
0.805 0.912
Ubx
M06274_2.00
Drosophila melanogaster
TAATKD

HMATTA
B1H
Zhu et al.(2011)
Ubx_FlyReg_FBgn0003944
0.805 0.912
Ubx
M06275_2.00
Drosophila melanogaster
NTTWATKR

YMATWAAN
B1H
Zhu et al.(2011)
Ubx_SOLEXA_FBgn0003944
0.805 0.912
Ubx
M09680_2.00
Drosophila melanogaster
TTAATKR

YMATTAA
Misc
Kulakovskiy et al.(2009)
Ubx
0.805 0.912
Ubx
M10788_2.00
Drosophila melanogaster
NNVNNNNTAATKRNBHNND

HNNDVNYMATTANNNNBNN
Transfac
Matys et al.(2006)
I$UBX_01
0.805 0.912
Hoxd8
M00436_2.00
Mus musculus
NNWWYNNN

NNNRWWNN
PBM
Berger et al.(2008)
Hoxd8_2644
0.805 0.789
HOXB7
M00331_2.00
Homo sapiens
NNNNNNY

RNNNNNN
PBM
Barrera et al.(2016)
HOXB7_K191R
0.798 0.965
Hoxc8
M00391_2.00
Mus musculus
NNDNYNNNN

NNNNRNHNN
PBM
Berger et al.(2008)
Hoxc8_3429
0.784 0.807
HOXC8
M04912_2.00
Homo sapiens
NYAATTRN

NYAATTRN
SELEX
Yin et al.(2017)
HOXC8_FL_HT-SELEX
0.784 0.807
HOXC8
M10636_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXC8_Q3
0.784 0.807
HOXC8
M04913_2.00
Homo sapiens
NYMATKRN

NYMATKRN
SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_1
0.784 0.807
HOXC8
M04914_2.00
Homo sapiens
NTWAYGRY

RYCRTWAN
SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_2
0.784 0.807
HOXB7
M00332_2.00
Homo sapiens
NDWATATAYN

NRTATATWHN
PBM
Barrera et al.(2016)
HOXB7_M190L
0.779 0.965
egl-5
M09581_2.00
Caenorhabditis elegans
DWTTWATGGS

SCCATWAAWH
Misc
Heinz et al.(2010)
cElegans-L3-EGL5_modEncode
0.750 0.579
CBG00023
M02062_2.00
Caenorhabditis briggsae
NWWATKDNNN

NNNHMATWWN
PBM
Weirauch et al.(2014)
pTH5778
0.750 0.561
Q8I9J5_9BILA
M02214_2.00
Spadella cephaloptera
NVTAWTWABN

NVTWAWTABN
PBM
Weirauch et al.(2014)
pTH6164
0.726 0.684
Scr
M03799_2.00
Drosophila melanogaster
BTAATKRB

VYMATTAV
SELEX
Nitta et al.(2015)
Scr_1
0.703 0.930
Scr
M06496_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0203.1
0.703 0.930
Scr
M06266_2.00
Drosophila melanogaster
HVYTAATKA

TMATTARBD
B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339
0.703 0.930
Scr
M06267_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339
0.703 0.930
Hoxa5
M00478_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Hoxa5_3415
0.703 0.912
Hoxb5
M00480_2.00
Mus musculus
NWDWTNNNN

NNNNAWHWN
PBM
Berger et al.(2008)
Hoxb5_3122
0.703 0.912
HOXB5
M03125_2.00
Homo sapiens
NNKAATKRNN

NNYMATTMNN
SELEX
Jolma et al.(2013)
HOXB5_1
0.703 0.912
HOXA5
M04968_2.00
Homo sapiens
STAATKRS

SYMATTAS
SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX
0.703 0.912
HOXA5
M04971_2.00
Homo sapiens
NTMATKRB

VYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX
0.703 0.912
HOXB5
M05051_2.00
Homo sapiens
NTAATKRV

BYMATTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX
0.703 0.912
HOXB5
M05054_2.00
Homo sapiens
STMATKAB

VTMATKAS
SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX
0.703 0.912
HOXA5
M10652_2.00
Homo sapiens
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR

YSCHHHBHYCYYMATTABTVNDHVMVHYCN
Transfac
Matys et al.(2006)
V$HOX13_01
0.703 0.912
HOXA5
M08457_2.00
Homo sapiens
CDBWAATK

MATTWVHG
COMPILED
Mathelier et al.(2014)
MA0158.1
0.703 0.912
HOXA5
M04969_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1
0.703 0.912
HOXA5
M04970_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2
0.703 0.912
HOXA5
M04972_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1
0.703 0.912
HOXA5
M04973_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2
0.703 0.912
HOXB5
M05052_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1
0.703 0.912
HOXB5
M05053_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2
0.703 0.912
HOXB5
M05055_2.00
Homo sapiens
NTMATKAB

VTMATKAN
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1
0.703 0.912
HOXB5
M05056_2.00
Homo sapiens
HTAAYGAY

RTCRTTAD
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2
0.703 0.912
Hoxc5
M00422_2.00
Mus musculus
NWRATND

HNATYWN
PBM
Berger et al.(2008)
Hoxc5_2630
0.691 0.877
CBG23031
M01245_2.00
Caenorhabditis briggsae
NTTWATKRNN

NNYMATWAAN
PBM
Lambert et al.(2019)
pTH11458
0.681 0.526
Hoxb4
M00479_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Hoxb4_2627
0.662 0.877
HOXB4
M05343_2.00
Homo sapiens
YTAATKAY

RTMATTAR
SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX
0.662 0.877
HOXB4
M09162_2.00
Homo sapiens
YTAATKRS

SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B
0.662 0.877
Hoxb4
M09204_2.00
Mus musculus
YTAATKRS

SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A
0.662 0.877
Hoxb4
M09576_2.00
Mus musculus
TGATDRATKRSN

NSYMATYHATCA
Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014
0.662 0.877
HOXB4
M05344_2.00
Homo sapiens
HTAAYGAY

RTCRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1
0.662 0.877
HOXB4
M05345_2.00
Homo sapiens
HTAAYKAB

VTMRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2
0.662 0.877
HOXC4
M00330_2.00
Homo sapiens
YTAATTRB

VYAATTAR
PBM
Barrera et al.(2016)
HOXC4_REF
0.650 0.877
Hoxc4
M00530_2.00
Mus musculus
NWAATNDNN

NNHNATTWN
PBM
Berger et al.(2008)
Hoxc4_3491
0.650 0.877
HOXC4
M05385_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX
0.650 0.877
HOXC4
M05386_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1
0.650 0.877
HOXC4
M05387_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2
0.650 0.877
HOXC4
M00328_2.00
Homo sapiens
YTAATTAB

VTAATTAR
PBM
Barrera et al.(2016)
HOXC4_N178S
0.650 0.860
Dfd
M03784_2.00
Drosophila melanogaster
VNTAAYKRBN

NVYMRTTANB
SELEX
Nitta et al.(2015)
Dfd_1
0.648 0.860
Dfd
M03785_2.00
Drosophila melanogaster
VYTAATKAYN

NRTMATTARB
SELEX
Nitta et al.(2015)
Dfd_2
0.648 0.860
Dfd
M06481_2.00
Drosophila melanogaster
YTAATGA

TCATTAR
B1H
Mathelier et al.(2014)
MA0186.1
0.648 0.860
Dfd
M06226_2.00
Drosophila melanogaster
VYTAATGA

TCATTAAB
B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439
0.648 0.860
Dfd
M06227_2.00
Drosophila melanogaster
TTAATKRY

RYMATTAA
B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439
0.648 0.860
Dfd
M06228_2.00
Drosophila melanogaster
NBTAATKR

YMATTAVN
B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439
0.648 0.860
Dfd
M09675_2.00
Drosophila melanogaster
TTAATKRB

VYMATTAA
Misc
Kulakovskiy et al.(2009)
Dfd
0.648 0.860
Dfd
M10784_2.00
Drosophila melanogaster
NNNNRKTAATNNNNNN

NNNNNNATTAMYNNNN
Transfac
Matys et al.(2006)
I$DFD_01
0.648 0.860
HOXD4
M05273_2.00
Homo sapiens
NTMATKRV

BYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX
0.646 0.860
HOXD4
M05276_2.00
Homo sapiens
NTAATKRB

VYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX
0.646 0.860
HOXD4
M05274_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1
0.646 0.860
HOXD4
M05275_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2
0.646 0.860
HOXD4
M05277_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1
0.646 0.860
HOXD4
M05278_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2
0.646 0.860
Hoxa4
M00383_2.00
Mus musculus
NTAATBDNN

NNHVATTAN
PBM
Berger et al.(2008)
Hoxa4_3426
0.646 0.842
HOXA4
M05381_2.00
Homo sapiens
NTAATKRY

RYMATTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX
0.646 0.842
HOXA4
M10755_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA4_Q2
0.646 0.842
HOXA4
M05382_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX
0.646 0.842
SPU_026099
M02175_2.00
Strongylocentrotus purpuratus
KTAATTRB

VYAATTAM
PBM
Weirauch et al.(2014)
pTH6140
0.634 0.737
Pdx1
M00446_2.00
Mus musculus
NWRAYNNN

NNNRTYWN
PBM
Berger et al.(2008)
Ipf1_3815
0.633 0.702
PDX1
M03155_2.00
Homo sapiens
NTAATTRNNNYTAATTRN

NYAATTARNNNYAATTAN
SELEX
Jolma et al.(2013)
PDX1_1
0.633 0.702
PDX1
M03156_2.00
Homo sapiens
BTAATKRN

NYMATTAV
SELEX
Jolma et al.(2013)
PDX1_2
0.633 0.702
PDX1
M05161_2.00
Homo sapiens
YTAATKRB

VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX
0.633 0.702
PDX1
M09147_2.00
Homo sapiens
TGATWGATK

MATCWATCA
Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A
0.633 0.702
Pdx1
M09192_2.00
Mus musculus
VYTAATGRB

VYCATTARB
Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B
0.633 0.702
Pdx1
M09571_2.00
Mus musculus
TGATTRATKR

YMATYAATCA
Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281
0.633 0.702
PDX1
M10699_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_01
0.633 0.702
PDX1
M10700_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_02
0.633 0.702
PDX1
M10701_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_03
0.633 0.702
PDX1
M10702_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_04
0.633 0.702
PDX1
M10703_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_05
0.633 0.702
PDX1
M10704_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4_01
0.633 0.702
PDX1
M10705_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4
0.633 0.702
PDX1
M10706_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5_01
0.633 0.702
PDX1
M10707_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5
0.633 0.702
PDX1
M10708_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q6
0.633 0.702
PDX1
M05162_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1
0.633 0.702
PDX1
M05163_2.00
Homo sapiens
YTAATKRB

VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2
0.633 0.702
Q0N4M8_NEMVE
M02166_2.00
Nematostella vectensis
HTAATKAC

GTMATTAD
PBM
Weirauch et al.(2014)
pTH6215
0.618 0.719
lin-39
M08211_2.00
Caenorhabditis elegans
GATTGATG

CATCAATC
ChIP-seq
Contrino et al.(2012)
Mw154
0.618 0.754
lin-39
M09582_2.00
Caenorhabditis elegans
DTGATWRATK

MATYWATCAH
Misc
Heinz et al.(2010)
cElegans.L3-LIN39_modEncode
0.618 0.754
Hoxd3
M00531_2.00
Mus musculus
NTAATNDN

NHNATTAN
PBM
Berger et al.(2008)
Hoxd3_1742
0.618 0.719
Hoxa3
M00172_2.00
Mus musculus
NTAATKRNNN

NNNYMATTAN
PBM
Badis et al.(2009)
Hoxa3_2783
0.618 0.719
Hoxa3
M00532_2.00
Mus musculus
NTAATKRNN

NNYMATTAN
PBM
Berger et al.(2008)
Hoxa3_2783
0.618 0.719
Hoxd3
M03287_2.00
Mus musculus
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxd3_1
0.618 0.719
HOXD3
M05101_2.00
Homo sapiens
CTAATTAS

STAATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_HT-SELEX
0.618 0.719
HOXA3
M10651_2.00
Homo sapiens
SVTWNDDKB

VMHHNWABS
Transfac
Matys et al.(2006)
V$HOXA3_01
0.618 0.719
HOXD3
M05102_2.00
Homo sapiens
YTAAYGAY

RTCRTTAR
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_1
0.618 0.719
HOXD3
M05103_2.00
Homo sapiens
CTAATKAC

GTMATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_2
0.618 0.719
Hoxb3
M00504_2.00
Mus musculus
NTAATKRNN

NNYMATTAN
PBM
Berger et al.(2008)
Hoxb3_1720
0.618 0.702
HOXB3
M03126_2.00
Homo sapiens
NBTAATKRNN

NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXB3_1
0.618 0.702
HOXC4
M00329_2.00
Homo sapiens
NTAATKRNN

NNYMATTAN
PBM
Barrera et al.(2016)
HOXC4_R158L
0.618 0.860
zen
M03805_2.00
Drosophila melanogaster
BTAATKRB

VYMATTAV
SELEX
Nitta et al.(2015)
zen_1
0.617 0.649
zen
M06500_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0256.1
0.617 0.649
zen
M06276_2.00
Drosophila melanogaster
NBYTAATKA

TMATTARBN
B1H
Zhu et al.(2011)
Zen_Cell_FBgn0004053
0.617 0.649
zen
M06277_2.00
Drosophila melanogaster
AANWTWAWTG

CAWTWAWNTT
B1H
Zhu et al.(2011)
zen_FlyReg_FBgn0004053
0.617 0.649
zen
M06278_2.00
Drosophila melanogaster
NYTAATKA

TMATTARN
B1H
Zhu et al.(2011)
Zen_SOLEXA_FBgn0004053
0.617 0.649
zen2
M02118_2.00
Drosophila melanogaster
NNTAATKRNN

NNYMATTANN
PBM
Weirauch et al.(2014)
pTH5479
0.616 0.649
zen2
M03806_2.00
Drosophila melanogaster
BTAATKAS

STMATTAV
SELEX
Nitta et al.(2015)
zen2_1
0.616 0.649
zen2
M03807_2.00
Drosophila melanogaster
BTAATKWNNVRNNNNYBNNWMATTAV

BTAATKWNNVRNNNNYBNNWMATTAV
SELEX
Nitta et al.(2015)
zen2_2
0.616 0.649
zen2
M06501_2.00
Drosophila melanogaster
BTAATKA

TMATTAV
B1H
Mathelier et al.(2014)
MA0257.1
0.616 0.649
zen2
M06279_2.00
Drosophila melanogaster
HNBTAATKA

TMATTAVND
B1H
Zhu et al.(2011)
Zen2_Cell_FBgn0004054
0.616 0.649
zen2
M06280_2.00
Drosophila melanogaster
NNNTAATKRN

NYMATTANNN
B1H
Zhu et al.(2011)
zen2_SOLEXA_2_FBgn0004054
0.616 0.649
zen2
M06281_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
Zen2_SOLEXA_FBgn0004054
0.616 0.649
Q9GP48_9TURB
M02217_2.00
Discocelis tigrina
DTAATTAB

VTAATTAH
PBM
Weirauch et al.(2014)
pTH6515
0.606 0.596
Q24780_9CNID
M02205_2.00
Eleutheria dichotoma
NNYTAATTAMN

NKTAATTARNN
PBM
Weirauch et al.(2014)
pTH6308
0.601 0.614
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GB51292-PA Homeodomain 271 327

Links

Other Homeodomain family TFs
Other Apis mellifera TFs

1849 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_06160 Capronia coronata A1O1_06160 I
A1O3_05809 Capronia epimyces A1O3_05809 I
A1O5_09709 Cladophialophora psammophila A1O5_09709 I
A1O7_03784 Cladophialophora yegresii A1O7_03784 I
A1O9_00245 Exophiala aquamarina A1O9_00245 I
A1Q1_02900 Trichosporon asahii A1Q1_02900 I
AB09574.1 Alternaria brassicicola AB09574.1 I
ACRE_008130 Acremonium chrysogenum ACRE_008130 I
ARB_01203 Arthroderma benhamiae ARB_01203 I
AUEXF2481DRAFT_960 Aureobasidium subglaciale AUEXF2481DRAFT_960 I
BAUCODRAFT_123056 Baudoinia compniacensis BAUCODRAFT_123056 I
BDDG_03448 Blastomyces dermatitidis BDDG_03448 I
BGHDH14_bgh06775 Blumeria graminis BGHDH14_bgh06775 I
BN7_3996 Wickerhamomyces ciferrii BN7_3996 I
BN946_scf185044.g2 Trametes cinnabarina BN946_scf185044.g2 I
BOTBODRAFT_519418 Botryobasidium botryosum BOTBODRAFT_519418 I
ACLA_037630 Aspergillus clavatus CADACLAG00003672 I
CADAFLAG00001276 Aspergillus flavus CADAFLAG00001276 I
AFUA_3G09820 Aspergillus fumigatus CADAFUAG00005045 I
CADANGAG00012821 Aspergillus niger CADANGAG00012821 I
ANIA_05003 Aspergillus nidulans CADANIAG00005390 I
CADAORAG00003153 Aspergillus oryzae CADAORAG00003153 I
ATEG_04506 Aspergillus terreus CADATEAG00009609 I
NFIA_067480 Neosartorya fischeri CADNFIAG00006316 I
CANTEDRAFT_95274 Candida tenuis CANTEDRAFT_95274 I
CaO19.723 Candida albicans CaO19.723 D
CaO19.8342 Candida albicans CaO19.8342 I
CC1G_04895 Coprinopsis cinerea CC1G_04895 I
CCM_01169 Cordyceps militaris CCM_01169 I
CD36_31890 Candida dubliniensis CD36_31890 I
CERSUDRAFT_27469 Ceriporiopsis subvermispora CERSUDRAFT_27469 I
CFIO01_12503 Colletotrichum fioriniae CFIO01_12503 I
CGGC5_14586 Colletotrichum gloeosporioides CGGC5_14586 I
CH063_14231 Colletotrichum higginsianum CH063_14231 I
CHGG_00101 Chaetomium globosum CHGG_00101 I
CIMG_01926 Coccidioides immitis CIMG_01926 I
CLUG_00627 Candida lusitaniae CLUG_00627 I
CLUG_00627 Clavispora lusitaniae CLUG_00627 I
CNH00870 Cryptococcus neoformans CNH00870 I
Cob_02042 Colletotrichum orbiculare Cob_02042 I
COCC4DRAFT_81973 Bipolaris maydis COCC4DRAFT_81973 I
COCCADRAFT_100277 Bipolaris zeicola COCCADRAFT_100277 I
COCMIDRAFT_31450 Bipolaris oryzae COCMIDRAFT_31450 I
COCSADRAFT_299644 Bipolaris sorokiniana COCSADRAFT_299644 I
COCVIDRAFT_101237 Bipolaris victoriae COCVIDRAFT_101237 I
CORT_0D06130 Candida orthopsilosis CORT_0D06130 I
CPAG_00564 Candida parapsilosis CPAG_00564 I
CPC735_045950 Coccidioides posadasii CPC735_045950 I
CPUR_05468 Claviceps purpurea CPUR_05468 I
CSUB01_09194 Colletotrichum sublineola CSUB01_09194 I
CTHT_0049900 Chaetomium thermophilum CTHT_0049900 I
CTRG_00608 Candida tropicalis CTRG_00608 I
CY34DRAFT_106933 Suillus luteus CY34DRAFT_106933 I
DEHA2E05984g Debaryomyces hansenii DEHA2E05984g I
DICSQDRAFT_68000 Dichomitus squalens DICSQDRAFT_68000 I
DOTSEDRAFT_73378 Dothistroma septosporum DOTSEDRAFT_73378 I
EPUS_00232 Endocarpon pusillum EPUS_00232 I
estExt_fgenesh1_pg.C_160092 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_160092 I
estExt_fgenesh1_pg.C_chr_6.10408 Pichia stipitis estExt_fgenesh1_pg.C_chr_6.10408 I
estExt_fgenesh2_pg.C_130083 Neurospora discreta estExt_fgenesh2_pg.C_130083 I
estExt_Genewise1Plus.C_100260 Cryphonectria parasitica estExt_Genewise1Plus.C_100260 I
estExt_Genewise1Plus.C_chr_61186 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_61186 I
EURHEDRAFT_513254 Aspergillus ruber EURHEDRAFT_513254 I
EV44_g5870 Erysiphe necator EV44_g5870 I
e_gw1.00168.137.1 Aspergillus carbonarius e_gw1.00168.137.1 I
FFUJ_13707 Fusarium fujikuroi FFUJ_13707 I
fgeneshTM_pg.14_#_13 Tremella mesenterica fgeneshTM_pg.14_#_13 I
FGRRES_07928 Fusarium graminearum FGRRES_07928 I
FOMPIDRAFT_1152934 Fomitopsis pinicola FOMPIDRAFT_1152934 I
FOXG_03744 Fusarium oxysporum FOXG_03744 I
FPSE_11009 Fusarium pseudograminearum FPSE_11009 I
FVEG_12119 Fusarium verticillioides FVEG_12119 I
G210_0527 Candida maltosa G210_0527 I
G647_01978 Cladophialophora carrionii G647_01978 I
GALMADRAFT_214025 Galerina marginata GALMADRAFT_214025 I
GGTG_05287 Gaeumannomyces graminis GGTG_05287 I
GLOTRDRAFT_123536 Gloeophyllum trabeum GLOTRDRAFT_123536 I
GLRG_01880 Colletotrichum graminicola GLRG_01880 I
GMDG_05315 Pseudogymnoascus destructans GMDG_05315 I
GNLVRS01_PISO0K14750g Millerozyma farinosa GNLVRS01_PISO0K14750g I
GNLVRS01_PISO0L14751g Millerozyma farinosa GNLVRS01_PISO0L14751g I
GSTUM_00000279001 Tuber melanosporum GSTUM_00000279001 I
H101_07165 Trichophyton interdigitale H101_07165 I
H102_08352 Trichophyton rubrum H102_08352 I
H105_08379 Trichophyton soudanense H105_08379 I
HCBG_02507 Histoplasma capsulatum HCBG_02507 D
HETIRDRAFT_432044 Heterobasidion irregulare HETIRDRAFT_432044 I
HMPREF1120_03484 Exophiala dermatitidis HMPREF1120_03484 I
HMPREF1541_01572 Cyphellophora europaea HMPREF1541_01572 I
HMPREF1624_08194 Sporothrix schenckii HMPREF1624_08194 I
HPODL_03573 Ogataea parapolymorpha HPODL_03573 I
HYDPIDRAFT_53532 Hydnomerulius pinastri HYDPIDRAFT_53532 I
J056_003358 Wallemia ichthyophaga J056_003358 I
JAAARDRAFT_192411 Jaapia argillacea JAAARDRAFT_192411 I
JL09_g2472 Pichia kudriavzevii JL09_g2472 I
K437DRAFT_47309 Tilletiaria anomala K437DRAFT_47309 I
K443DRAFT_134698 Laccaria amethystina K443DRAFT_134698 I
KUCA_T00003197001 Kuraishia capsulata KUCA_T00003197001 I
L804_06415 Cryptococcus gattii L804_06415 I
LACBIDRAFT_333777 Laccaria bicolor LACBIDRAFT_333777 I
LELG_03123 Lodderomyces elongisporus LELG_03123 I
LEMA_P009850.1 Leptosphaeria maculans LEMA_P009850.1 I
M404DRAFT_1003503 Pisolithus tinctorius M404DRAFT_1003503 I
M407DRAFT_27760 Tulasnella calospora M407DRAFT_27760 I
M408DRAFT_27403 Serendipita vermifera M408DRAFT_27403 I
M413DRAFT_6754 Hebeloma cylindrosporum M413DRAFT_6754 I
M437DRAFT_58276 Aureobasidium melanogenum M437DRAFT_58276 I
M438DRAFT_330979 Aureobasidium pullulans M438DRAFT_330979 I
MAJ_09872 Metarhizium majus MAJ_09872 I
MAM_04533 Metarhizium album MAM_04533 I
MAPG_03655 Magnaporthe poae MAPG_03655 I
MBR_08934 Metarhizium brunneum MBR_08934 I
MCYG_03437 Microsporum canis MCYG_03437 I
MGG_03451 Magnaporthe oryzae MGG_03451 I
MGU_09072 Metarhizium guizhouense MGU_09072 I
MGYG_00602 Microsporum gypseum MGYG_00602 I
Moror_724 Moniliophthora roreri Moror_724 I
MPH_04941 Macrophomina phaseolina MPH_04941 I
MVLG_05812 Microbotryum violaceum MVLG_05812 I
Mycgr3G73447 Zymoseptoria tritici Mycgr3G73447 I
MYCTH_2309600 Myceliophthora thermophila MYCTH_2309600 I
NCU05064 Neurospora crassa NCU05064 D
NEUTE1DRAFT_69818 Neurospora tetrasperma NEUTE1DRAFT_69818 I
OIDMADRAFT_76070 Oidiodendron maius OIDMADRAFT_76070 I
PAAG_07929 Paracoccidioides sp lutzii PAAG_07929 I
PABG_07511 Paracoccidioides brasiliensis PABG_07511 I
PaG_06622 Pseudozyma aphidis PaG_06622 I
PAN0_008d3647 Pseudozyma antarctica PAN0_008d3647 I
PAXINDRAFT_169952 Paxillus involutus PAXINDRAFT_169952 I
PAXRUDRAFT_831130 Paxillus rubicundulus PAXRUDRAFT_831130 I
Pc12g15680 Penicillium chrysogenum Pc12g15680 I
PCH_Pc12g15680 Penicillium rubens PCH_Pc12g15680 I
PDE_05006 Penicillium oxalicum PDE_05006 I
PDIP_76330 Penicillium digitatum PDIP_76330 I
PEX1_046150 Penicillium expansum PEX1_046150 I
PFICI_03479 Pestalotiopsis fici PFICI_03479 I
PGUG_05571 Candida guilliermondii PGUG_05571 I
PGUG_05571 Meyerozyma guilliermondii PGUG_05571 I
PHLGIDRAFT_291717 Phlebiopsis gigantea PHLGIDRAFT_291717 I
PHSY_000731 Pseudozyma hubeiensis PHSY_000731 I
PICST_68117 Scheffersomyces stipitis PICST_68117 I
PISMIDRAFT_677287 Pisolithus microcarpus PISMIDRAFT_677287 I
PITC_015130 Penicillium italicum PITC_015130 I
PMAA_025670 Talaromyces marneffei PMAA_025670 I
PMAA_025670 Penicillium marneffei PMAA_025670 I
PNEG_03244 Pneumocystis murina PNEG_03244 I
PODANS_5_7890 Podospora anserina PODANS_5_7890 I
PTRG_01771 Pyrenophora triticirepentis PTRG_01771 I
PTT_17956 Pyrenophora teres PTT_17956 I
PV04_05548 Capronia semiimmersa PV04_05548 I
PV05_06394 Exophiala xenobiotica PV05_06394 I
PV06_04721 Exophiala oligosperma PV06_04721 I
PV07_08215 Cladophialophora immunda PV07_08215 I
PV08_10482 Exophiala spinifera PV08_10482 I
PV09_03526 Verruconis gallopava PV09_03526 I
PV10_00614 Exophiala mesophila PV10_00614 I
PV11_04107 Exophiala sideris PV11_04107 I
PVAR5_1874 Byssochlamys spectabilis PVAR5_1874 I
RHTO_02693 Rhodosporidium toruloides RHTO_02693 I
RTG_01578 Rhodotorula glutinis RTG_01578 I
S40288_08426 Stachybotrys chartarum S40288_08426 I
SBOR_1720 Sclerotinia borealis SBOR_1720 I
SCHCODRAFT_269975 Schizophyllum commune SCHCODRAFT_269975 I
SCLCIDRAFT_1223782 Scleroderma citrinum SCLCIDRAFT_1223782 I
SEPMUDRAFT_149169 Sphaerulina musiva SEPMUDRAFT_149169 I
SETTUDRAFT_171861 Setosphaeria turcica SETTUDRAFT_171861 I
SMAC_07581 Sordaria macrospora SMAC_07581 I
SNOG_03167 Stagonospora nodorum SNOG_03167 I
SPAPADRAFT_59388 Spathaspora passalidarum SPAPADRAFT_59388 I
SPBR_04121 Sporothrix brasiliensis SPBR_04121 I
sr13256 Sporisorium reilianum sr13256 I
SS1G_11199 Sclerotinia sclerotiorum SS1G_11199 I
TEQG_00944 Trichophyton equinum TEQG_00944 I
TESG_04479 Trichophyton tonsurans TESG_04479 I
TRIATDRAFT_251939 Trichoderma atroviride TRIATDRAFT_251939 I
TRIVIDRAFT_50650 Trichoderma virens TRIVIDRAFT_50650 I
TRV_05314 Trichophyton verrucosum TRV_05314 I
TSTA_073250 Talaromyces stipitatus TSTA_073250 I
U727_00431251191 Penicillium solitum U727_00431251191 I
UCRNP2_5767 Neofusicoccum parvum UCRNP2_5767 I
UHOR_03389 Ustilago hordei UHOR_03389 I
UM02038 Ustilago maydis UM02038 I
UREG_06865 Uncinocarpus reesii UREG_06865 I
UV8b_5506 Ustilaginoidea virens UV8b_5506 I
V499_06515 Pseudogymnoascus pannorum V499_06515 I
VDAG_02286 Verticillium dahliae VDAG_02286 I
VHEMI02937 Torrubiella hemipterigena VHEMI02937 I
W97_03093 Coniosporium apollinis W97_03093 I
YALI0_B22176g Yarrowia lipolytica YALI0_B22176g I
Z517_11487 Fonsecaea pedrosoi Z517_11487 I
Z518_04882 Rhinocladiella mackenziei Z518_04882 I
Z519_10498 Cladophialophora bantiana Z519_10498 I