GB55198 (Apis mellifera)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GB55198 T218659_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.833 0.964
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.822 0.964
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.822 0.964
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.822 0.964
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.813 0.929
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.813 0.929
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.813 0.929
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.813 0.929
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.813 0.929
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.813 0.929
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.813 0.911
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.813 0.911
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.813 0.911
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.790 0.929
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GB55198-PA Homeodomain 225 283

Links

Other Homeodomain family TFs
Other Apis mellifera TFs

389 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SALL3 Anolis carolinensis ENSACAG00000000478 N
ENSAMEG00000010206 Ailuropoda melanoleuca ENSAMEG00000010206 N
ENSAPLG00000013214 Anas platyrhynchos ENSAPLG00000013214 N
SALL3 Canis familiaris ENSCAFG00000000013 N
SALL3 Callithrix jacchus ENSCJAG00000007332 N
SALL3 Cavia porcellus ENSCPOG00000008546 N
sall3b Danio rerio ENSDARG00000057586 N
sall3a Danio rerio ENSDARG00000079613 N
SALL3 Equus caballus ENSECAG00000015414 N
ENSFALG00000013343 Ficedula albicollis ENSFALG00000013343 N
SALL3 Homo sapiens ENSG00000256463 N
sall3a Gasterosteus aculeatus ENSGACG00000005503 N
ENSGALG00000012657 Gallus gallus ENSGALG00000012657 N
SALL3 Gorilla gorilla ENSGGOG00000008127 N
ENSGMOG00000006649 Gadus morhua ENSGMOG00000006649 N
ENSLOCG00000007831 Lepisosteus oculatus ENSLOCG00000007831 N
SALL3 Meleagris gallopavo ENSMGAG00000002297 N
SALL3 Macaca mulatta ENSMMUG00000000286 N
ENSMPUG00000016646 Mustela putorius furo ENSMPUG00000016646 N
Sall3 Mus musculus ENSMUSG00000024565 N
SALL1 Ornithorhynchus anatinus ENSOANG00000013399 N
ENSOARG00000017583 Ovis aries ENSOARG00000017583 N
SALL3 Oryctolagus cuniculus ENSOCUG00000029398 N
ENSONIG00000007305 Oreochromis niloticus ENSONIG00000007305 N
sall3a Oryzias latipes ENSORLG00000020718 N
ENSPANG00000006485 Papio anubis ENSPANG00000006485 N
ENSPFOG00000019127 Poecilia formosa ENSPFOG00000019127 N
ENSPPYG00000009253 Pongo abelii ENSPPYG00000009253 N
ENSPSIG00000008556 Pelodiscus sinensis ENSPSIG00000008556 N
SALL3 Pan troglodytes ENSPTRG00000010126 N
ENSSHAG00000015872 Sarcophilus harrisii ENSSHAG00000015872 N
ENSSTOG00000004145 Ictidomys tridecemlineatus ENSSTOG00000004145 N
sall1a Takifugu rubripes ENSTRUG00000008950 N
SALL3 Tursiops truncatus ENSTTRG00000004958 N
ENSXMAG00000009081 Xiphophorus maculatus ENSXMAG00000009081 N
Pvit_05136 Pogona vitticeps Pvit_05136 N