CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GGTG_10172
(
Gaeumannomyces graminis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
GGTG_10172
T218669_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03070
M02222_2.00
Neurospora crassa
NNYCAATAWW
WWTATTGRNN
PBM
Weirauch et al.(2014)
pTH5859
0.752
0.714
NCU03070
M02223_2.00
Neurospora crassa
NNHAYNDNN
NNHNRTDNN
PBM
Weirauch et al.(2014)
pTH9699
0.752
0.714
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GGTG_10172T0
Homeodomain
122
177
QPKPRLAKDEVELLEKEFQKNQKPSSGRKREIADILKVDQPRINNWFQNRRAKEKG
Links
Other
Homeodomain
family TFs
Other
Gaeumannomyces graminis
TFs
79 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action