GLYMA11G20520 (Glycine max)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GLYMA11G20520 T218842_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.863 0.964
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.863 0.964
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.863 0.964
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.857 0.911
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.857 0.911
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA11G20520.1 Homeodomain 24 83

Links

Other Homeodomain family TFs
Other Glycine max TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BOTBODRAFT_69322 Botryobasidium botryosum BOTBODRAFT_69322 I 0.000
CERSUDRAFT_114695 Ceriporiopsis subvermispora CERSUDRAFT_114695 I 0.000
DACRYDRAFT_22521 Dacryopinax sp DACRYDRAFT_22521 I 0.000
DICSQDRAFT_88737 Dichomitus squalens DICSQDRAFT_88737 I 0.000
GALMADRAFT_259271 Galerina marginata GALMADRAFT_259271 I 0.000
K443DRAFT_308353 Laccaria amethystina K443DRAFT_308353 I 0.000
LACBIDRAFT_254568 Laccaria bicolor LACBIDRAFT_254568 I 0.000
LACBIDRAFT_254611 Laccaria bicolor LACBIDRAFT_254611 I 0.000
M407DRAFT_11510 Tulasnella calospora M407DRAFT_11510 I 0.000
M408DRAFT_332528 Serendipita vermifera M408DRAFT_332528 I 0.000
M413DRAFT_449306 Hebeloma cylindrosporum M413DRAFT_449306 I 0.000
V565_176590 Rhizoctonia solani V565_176590 I 0.000