GSMUA_Achr10G26570_001 (Musa acuminata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GSMUA_Achr10G26570_001 T219086_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WUS
M06905_2.00 		Arabidopsis thaliana
TRAWTGAWTGA
TCAWTCAWTYA		 Dap-seq
OMalley et al.(2016)
WUS1_col_a 		0.767 0.684
WUS
M06906_2.00 		Arabidopsis thaliana
TGAWTGAWTGW
WCAWTCAWTCA		 Dap-seq
OMalley et al.(2016)
WUS1_colamp_a 		0.767 0.684
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr10P26570_001 Homeodomain 15 76

Links

Other Homeodomain family TFs
Other Musa acuminata TFs

468 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG000956.1 Alligator sinensis Alligator_sinensis_CCG000956.1 I
CPIJ001753 Culex quinquefasciatus CPIJ001753 N
CpipJ_CPIJ001753 Culex pipiens CpipJ_CPIJ001753 N
DILT_0000398401 Diphyllobothrium latum DILT_0000398401 I
ENSAPLG00000005437 Anas platyrhynchos ENSAPLG00000005437 I
spi1b Danio rerio ENSDARG00000000767 I
SPDEF Danio rerio ENSDARG00000029930 N
ETS1 Dasypus novemcinctus ENSDNOG00000045506 I
SPDEF Dasypus novemcinctus ENSDNOG00000047693 N
Etv4 Dipodomys ordii ENSDORG00000013847 I
SPDEF Erinaceus europaeus ENSEEUG00000010400 N
ETV6 Echinops telfairi ENSETEG00000002501 I
ETS2 Felis catus ENSFCAG00000007489 I
ELK3 Homo sapiens ENSG00000111145 D
ENSMEUG00000003760 Macropus eugenii ENSMEUG00000003760 I
ETS1 Meleagris gallopavo ENSMGAG00000000967 I
ENSMGAG00000003467 Meleagris gallopavo ENSMGAG00000003467 I
Spic Mus musculus ENSMUSG00000004359 D
Ehf Mus musculus ENSMUSG00000012350 D
Elf5 Mus musculus ENSMUSG00000027186 D
ENSOANG00000021194 Ornithorhynchus anatinus ENSOANG00000021194 N
ENSP00000227163 Macaca fascicularis ENSP00000227163 I
ETS2 Procavia capensis ENSPCAG00000001036 I
ELF3 Procavia capensis ENSPCAG00000012191 I
ETV6 Procavia capensis ENSPCAG00000016039 I
ETV2 Sorex araneus ENSSARG00000010742 N
ENSSSCG00000024457 Sus scrofa ENSSSCG00000024457 I
ENSTBEG00000014406 Tupaia belangeri ENSTBEG00000014406 I
ENSTBEG00000017397 Tupaia belangeri ENSTBEG00000017397 I
ENSTNIG00000007898 Tetraodon nigroviridis ENSTNIG00000007898 N
ENSVPAG00000005650 Vicugna pacos ENSVPAG00000005650 I
ENSVPAG00000009100 Vicugna pacos ENSVPAG00000009100 I
Gfo_R003012 Geospiza fortis Gfo_R003012 N
GPLIN_000810800 Globodera pallida GPLIN_000810800 N
HCOI00865000 Haemonchus contortus HCOI00865000 N
HelroG189408 Helobdella robusta HelroG189408 N
HMEL005115 Heliconius melpomene HMEL005115 N
HMEL013736 Heliconius melpomene HMEL013736 N
HPBE_0001740201 Heligmosomoides bakeri HPBE_0001740201 I
L893_g22986 Steinernema glaseri L893_g22986 N
L898_g23769 Steinernema monticolum L898_g23769 N
ML46088a Mnemiopsis leidyi ML46088a N
nDi.2.2.2.g11508 Dirofilaria immitis nDi.2.2.2.g11508 N
OESDEN_02390 Oesophagostomum dentatum OESDEN_02390 I
OESDEN_14003 Oesophagostomum dentatum OESDEN_14003 I
PXEA_0000391701 Protopolystoma xenopodis PXEA_0000391701 N
scaffold700-EXSNAP2012.3 Pristionchus exspectatus scaffold700-EXSNAP2012.3 N
SNAPOd2T00022291001 Oikopleura dioica SNAPOd2T00022291001 N
SPER_0001231601 Spirometra erinaceieuropaei SPER_0001231601 N
SPER_0003941101 Spirometra erinaceieuropaei SPER_0003941101 I
SVUK_0001517201 Strongylus vulgaris SVUK_0001517201 N
gabpa.S Xenopus laevis XB-GENE-17331756 I