GSMUA_Achr7G00210_001 (Musa acuminata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GSMUA_Achr7G00210_001 T219194_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATML1
M02048_2.00 		Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203 		0.705 0.789
ATML1
M10626_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01 		0.705 0.789
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.693 0.772
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.693 0.772
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.687 0.667
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.687 0.719
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.687 0.719
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.687 0.684
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.672 0.667
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.672 0.667
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.656 0.684
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.656 0.684
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.656 0.684
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.613 0.632
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.613 0.632
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr7P00210_001 Homeodomain 37 94

Links

Other Homeodomain family TFs
Other Musa acuminata TFs

591 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000016625 Ailuropoda melanoleuca ENSAMEG00000016625 I
ENSDORG00000000463 Dipodomys ordii ENSDORG00000000463 I
PBX2 Echinops telfairi ENSETEG00000018718 I
PBX3 Homo sapiens ENSG00000167081 D
pbx3b Gasterosteus aculeatus ENSGACG00000011999 I
PBX3 Gorilla gorilla ENSGGOG00000009025 I
PBX1 Myotis lucifugus ENSMLUG00000006941 I
ENSNLEG00000017398 Nomascus leucogenys ENSNLEG00000017398 I
PBX1 Oryctolagus cuniculus ENSOCUG00000007609 I
pbx3b Oryzias latipes ENSORLG00000013269 I
ENSP00000362586 Macaca fascicularis ENSP00000362586 I
ENSP00000362586-D3 Bos grunniens ENSP00000362586-D3 I
PBX3 Procavia capensis ENSPCAG00000006303 I
PBX3 Pteropus vampyrus ENSPVAG00000000742 I
pbx3b Takifugu rubripes ENSTRUG00000008751 I
maker-nMf.1.1.scaf02297-augustus-gene-0.11 Meloidogyne floridensis maker-nMf.1.1.scaf02297-augustus-gene-0.11 I
TsM_000683000 Taenia solium TsM_000683000 I