CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pag1_scaffold_104-snap-gene-0.37
(
Pythium aphanidermatum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
maker-pag1_scaffold_104-snap-gene-0.37
T220394_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPA00000016589
Homeodomain
252
311
TQRRSRLERNANEFMVAWFLHHKANPYPSASERVEISRKTGLSEQQVRNWFANMRKRHWR
Links
Other
Homeodomain
family TFs
Other
Pythium aphanidermatum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_036870
Albugo laibachii
ALNC14_036870
N
0.608
e_gw1.3.305.1
Phytophthora capsici
e_gw1.3.305.1
N
0.733
F443_05618
Phytophthora parasitica
F443_05618
N
0.745
fgenesh_scip_prom.28083.9880
Phytophthora lateralis
fgenesh_scip_prom.28083.9880
N
0.745
fgenesh_scip_prom.46568.10844
Phytophthora kernoviae
fgenesh_scip_prom.46568.10844
N
0.755
maker-par_contig_359-snap-gene-0.8
Pythium arrhenomanes
maker-par_contig_359-snap-gene-0.8
N
0.619
maker-pir_contig_315-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_315-fgenesh-gene-0.0
N
0.758
maker-piw_contig_348-snap-gene-0.7
Pythium iwayamai
maker-piw_contig_348-snap-gene-0.7
N
0.758
Phyra74345
Phytophthora ramorum
Phyra74345
N
0.727
Phyra84059
Phytophthora ramorum
Phyra84059
N
0.745
Physo127312
Phytophthora sojae
Physo127312
N
0.745
PITG_01135
Phytophthora infestans
PITG_01135
N
0.749
PYU1_G001938
Pythium ultimum
PYU1_G001938
N
0.758
SPRG_07347
Saprolegnia parasitica
SPRG_07347
N
0.602