ORUFI03G00510 (Oryza rufipogon)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ORUFI03G00510 T221903_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.848 0.893
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.848 0.893
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.845 0.893
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.845 0.893
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.845 0.893
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI03G00510.1 Homeodomain 26 85
ORUFI03G00510.2 Homeodomain 26 85
ORUFI03G00510.3 Homeodomain 26 85
ORUFI03G00510.4 Homeodomain 26 85

Links

Other Homeodomain family TFs
Other Oryza rufipogon TFs

334 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_04931 Capronia epimyces A1O3_04931 I
ARB_00240 Arthroderma benhamiae ARB_00240 I
ACLA_084900 Aspergillus clavatus CADACLAG00007495 I
CADAFLAG00000859 Aspergillus flavus CADAFLAG00000859 I
CADAFLAG00004637 Aspergillus flavus CADAFLAG00004637 I
CADAFLAG00004736 Aspergillus flavus CADAFLAG00004736 I
AFUA_6G11230 Aspergillus fumigatus CADAFUAG00002339 I
AFUA_3G13600 Aspergillus fumigatus CADAFUAG00005567 I
CADANGAG00007073 Aspergillus niger CADANGAG00007073 I
ANIA_00568 Aspergillus nidulans CADANIAG00002110 D
ANIA_03769 Aspergillus nidulans CADANIAG00004949 D
CADAORAG00007608 Aspergillus oryzae CADAORAG00007608 I
CADAORAG00007699 Aspergillus oryzae CADAORAG00007699 I
ATEG_05044 Aspergillus terreus CADATEAG00003666 I
NFIA_056930 Neosartorya fischeri CADNFIAG00005285 I
NFIA_063760 Neosartorya fischeri CADNFIAG00006020 I
CIMG_04445 Coccidioides immitis CIMG_04445 I
CPC735_073100 Coccidioides posadasii CPC735_073100 I
CSUB01_08716 Colletotrichum sublineola CSUB01_08716 I
estExt_Genewise1.C_50767 Neurospora discreta estExt_Genewise1.C_50767 I
EURHEDRAFT_465981 Aspergillus ruber EURHEDRAFT_465981 I
e_gw1.36.139.1 Nectria haematococca e_gw1.36.139.1 I
fgenesh1_pm.00042_#_363 Aspergillus carbonarius fgenesh1_pm.00042_#_363 I
fgenesh1_pm.00659_#_1 Aspergillus carbonarius fgenesh1_pm.00659_#_1 I
fgenesh1_pm.00855_#_4 Aspergillus carbonarius fgenesh1_pm.00855_#_4 I
GLRG_07904 Colletotrichum graminicola GLRG_07904 I
GMDG_04760 Pseudogymnoascus destructans GMDG_04760 I
H101_00939 Trichophyton interdigitale H101_00939 I
H102_02125 Trichophyton rubrum H102_02125 I
H105_02141 Trichophyton soudanense H105_02141 I
HMPREF1624_07087 Sporothrix schenckii HMPREF1624_07087 I
MCYG_05706 Arthroderma otae MCYG_05706 I
MCYG_05706 Microsporum canis MCYG_05706 I
MGYG_02800 Microsporum gypseum MGYG_02800 I
PDE_07973 Penicillium oxalicum PDE_07973 I
PFICI_11852 Pestalotiopsis fici PFICI_11852 I
PMAA_012040 Penicillium marneffei PMAA_012040 N
PMAA_012040 Talaromyces marneffei PMAA_012040 N
PMAA_052840 Penicillium marneffei PMAA_052840 I
PMAA_052840 Talaromyces marneffei PMAA_052840 I
PV06_00500 Exophiala oligosperma PV06_00500 I
PV08_01656 Exophiala spinifera PV08_01656 I
PV11_04029 Exophiala sideris PV11_04029 N
PVAR5_6400 Byssochlamys spectabilis PVAR5_6400 I
SMAC_06700 Sordaria macrospora SMAC_06700 I
SPBR_03934 Sporothrix brasiliensis SPBR_03934 I
TEQG_00731 Trichophyton equinum TEQG_00731 I
TESG_04636 Trichophyton tonsurans TESG_04636 I
TRIATDRAFT_182375 Trichoderma atroviride TRIATDRAFT_182375 I
TRIATDRAFT_35738 Trichoderma atroviride TRIATDRAFT_35738 I
TRIREDRAFT_3605 Trichoderma reesei TRIREDRAFT_3605 I
TRIVIDRAFT_124610 Trichoderma virens TRIVIDRAFT_124610 I
TRIVIDRAFT_158628 Trichoderma virens TRIVIDRAFT_158628 N
TRV_05232 Trichophyton verrucosum TRV_05232 I
TSTA_020100 Talaromyces stipitatus TSTA_020100 I
TSTA_122680 Talaromyces stipitatus TSTA_122680 I
U727_00433165191 Penicillium solitum U727_00433165191 I
UREG_01672 Uncinocarpus reesii UREG_01672 I
VDAG_07912 Verticillium dahliae VDAG_07912 I
VDBG_01341 Verticillium alfalfae VDBG_01341 I
VDBG_01341 Verticillium albo atrum VDBG_01341 I