ORUFI08G02510 (Oryza rufipogon)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ORUFI08G02510 T221950_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATML1
M02048_2.00 		Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203 		0.843 0.930
ATML1
M10626_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01 		0.843 0.930
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.831 0.912
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.831 0.912
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.824 0.754
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.824 0.754
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.821 0.789
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.808 0.789
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.808 0.789
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.808 0.789
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.804 0.754
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.804 0.754
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.802 0.667
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.766 0.719
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.766 0.719
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI08G02510.1 Homeodomain 124 181

Links

Other Homeodomain family TFs
Other Oryza rufipogon TFs

620 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29767.m000208 Ricinus communis 29767.m000208 I
30174.m009135 Ricinus communis 30174.m009135 I
AC165171.2_FG002 Zea mays AC165171.2_FG002 I
AC198725.4_FG009 Zea mays AC198725.4_FG009 I
Al_scaffold_0008_672 Arabidopsis lyrata Al_scaffold_0008_672 I
AMTR_s00003p00229970 Amborella trichopoda AMTR_s00003p00229970 I
AMTR_s00012p00243090 Amborella trichopoda AMTR_s00012p00243090 I
AMTR_s00110p00091490 Amborella trichopoda AMTR_s00110p00091490 I
Aquca_002_00789 Aquilegia coerulea Aquca_002_00789 I
Aquca_003_00104 Aquilegia coerulea Aquca_003_00104 I
WRKY57 Arabidopsis thaliana AT1G69310 D
WRKY49 Arabidopsis thaliana AT5G43290 I
BGIOSGA000506 Oryza indica BGIOSGA000506 I
BGIOSGA004027 Oryza indica BGIOSGA004027 I
BGIOSGA005267 Oryza indica BGIOSGA005267 I
BGIOSGA009781 Oryza indica BGIOSGA009781 I
BGIOSGA017481 Oryza indica BGIOSGA017481 I
BGIOSGA024948 Oryza indica BGIOSGA024948 I
Bo2g062990 Brassica oleracea Bo2g062990 I
Bo6g108750 Brassica oleracea Bo6g108750 I
Bo9g059010 Brassica oleracea Bo9g059010 I
Bostr.10273s0439 Boechera stricta Bostr.10273s0439 I
Bostr.3148s0146 Boechera stricta Bostr.3148s0146 I
Bra004370 Brassica rapa Bra004370 I
Bra027480 Brassica rapa Bra027480 I
Bra038313 Brassica rapa Bra038313 I
BRADI1G08106 Brachypodium distachyon BRADI1G08106 I
BRADI1G59180 Brachypodium distachyon BRADI1G59180 I
BRADI2G44090 Brachypodium distachyon BRADI2G44090 I
Cagra.0537s0016 Capsella grandiflora Cagra.0537s0016 I
Cagra.9063s0001 Capsella grandiflora Cagra.9063s0001 I
Carubv10020765m.g Capsella rubella Carubv10020765m.g I
Carubv10026841m.g Capsella rubella Carubv10026841m.g I
cassava10589.m1 Manihot esculenta cassava10589.m1 I
cassava12685.valid.m1 Manihot esculenta cassava12685.valid.m1 I
cassava21779.m1 Manihot esculenta cassava21779.m1 I
Ca_11644 Cicer arietinum Ca_11644 I
chr1.CM0147.890.nc Lotus japonicus chr1.CM0147.890.nc I
chr2.CM0120.580.nd Lotus japonicus chr2.CM0120.580.nd I
chr4.CM0333.60.nd Lotus japonicus chr4.CM0333.60.nd I
Ciclev10013616m.g Citrus clementina Ciclev10013616m.g I
Ciclev10032285m.g Citrus clementina Ciclev10032285m.g I
Cla018477 Citrullus lanatus Cla018477 I
Cucsa.066300 Cucumis sativus Cucsa.066300 I
Cucsa.327760 Cucumis sativus Cucsa.327760 I
Eucgr.B03165 Eucalyptus grandis Eucgr.B03165 I
Eucgr.G02459 Eucalyptus grandis Eucgr.G02459 I
Eucgr.J02655 Eucalyptus grandis Eucgr.J02655 I
Eucgr.K03115 Eucalyptus grandis Eucgr.K03115 I
evm.TU.supercontig_1.104 Carica papaya evm.TU.supercontig_1.104 I
e_gw1.159.68.1 Physcomitrella patens e_gw1.159.68.1 I
e_gw1.35.333.1 Physcomitrella patens e_gw1.35.333.1 I
e_gw1.73.71.1 Physcomitrella patens e_gw1.73.71.1 I
F775_03121 Aegilops tauschii F775_03121 I
F775_14839 Aegilops tauschii F775_14839 I
F775_23740 Aegilops tauschii F775_23740 N
WRKY57 Arabidopsis lyrata fgenesh2_kg.2__1186__AT1G69310.1 I
fgenesh2_kg.97__1__AT5G43290.1 Arabidopsis lyrata fgenesh2_kg.97__1__AT5G43290.1 I
gene18438-v1.0-hybrid Fragaria vesca gene18438-v1.0-hybrid I
GLYMA01G06870 Glycine max GLYMA01G06870 I
GLYMA02G12830 Glycine max GLYMA02G12830 I
GLYMA07G16040 Glycine max GLYMA07G16040 I
GLYMA18G39970 Glycine max GLYMA18G39970 I
Gorai.003G150700 Gossypium raimondii Gorai.003G150700 I
Gorai.005G144500 Gossypium raimondii Gorai.005G144500 I
Gorai.006G171700 Gossypium raimondii Gorai.006G171700 I
Gorai.008G178100 Gossypium raimondii Gorai.008G178100 I
Gorai.012G040700 Gossypium raimondii Gorai.012G040700 I
Gorai.012G104800 Gossypium raimondii Gorai.012G104800 I
Gorai.012G119600 Gossypium raimondii Gorai.012G119600 I
Gorai.013G092300 Gossypium raimondii Gorai.013G092300 I
GRMZM2G018721 Zea mays GRMZM2G018721 I
GRMZM2G052671 Zea mays GRMZM2G052671 I
GRMZM2G143204 Zea mays GRMZM2G143204 I
GRMZM2G145554 Zea mays GRMZM2G145554 I
GSMUA_Achr10G00810_001 Musa acuminata GSMUA_Achr10G00810_001 I
GSMUA_Achr1G04770_001 Musa acuminata GSMUA_Achr1G04770_001 I
GSMUA_Achr2G16390_001 Musa acuminata GSMUA_Achr2G16390_001 I
GSMUA_Achr3G31310_001 Musa acuminata GSMUA_Achr3G31310_001 I
GSMUA_Achr4G23360_001 Musa acuminata GSMUA_Achr4G23360_001 I
GSMUA_Achr6G34870_001 Musa acuminata GSMUA_Achr6G34870_001 I
GSMUA_Achr7G15060_001 Musa acuminata GSMUA_Achr7G15060_001 I
GSMUA_Achr8G02180_001 Musa acuminata GSMUA_Achr8G02180_001 I
GSMUA_AchrUn_randomG17930_001 Musa acuminata GSMUA_AchrUn_randomG17930_001 I
GSMUA_AchrUn_randomG18710_001 Musa acuminata GSMUA_AchrUn_randomG18710_001 I
gw1.115.63.1 Physcomitrella patens gw1.115.63.1 I
gw1.137.58.1 Physcomitrella patens gw1.137.58.1 I
gw1.198.128.1 Physcomitrella patens gw1.198.128.1 I
LPERR01G20100 Leersia perrieri LPERR01G20100 I
LPERR01G31730 Leersia perrieri LPERR01G31730 I
LPERR01G39910 Leersia perrieri LPERR01G39910 I
LPERR03G29190 Leersia perrieri LPERR03G29190 I
LPERR05G22790 Leersia perrieri LPERR05G22790 I
Lus10010851.g Linum usitatissimum Lus10010851.g I
Lus10022278.g Linum usitatissimum Lus10022278.g I
Lus10024380.g Linum usitatissimum Lus10024380.g I
Lus10036891.g Linum usitatissimum Lus10036891.g I
Lus10037094.g Linum usitatissimum Lus10037094.g I
MDP0000193216 Malus domestica MDP0000193216 I
MDP0000205962 Malus domestica MDP0000205962 I
MDP0000215371 Malus domestica MDP0000215371 I
MDP0000255768 Malus domestica MDP0000255768 I
MDP0000707539 Malus domestica MDP0000707539 I
mgf005814m Mimulus guttatus mgf005814m I
mgf023486m Mimulus guttatus mgf023486m I
MLOC_58026 Hordeum vulgare MLOC_58026 I
MLOC_59259 Hordeum vulgare MLOC_59259 I
MLOC_7470 Hordeum vulgare MLOC_7470 I
MTR_5g043880 Medicago truncatula MTR_5g043880 I
MTR_7g062220 Medicago truncatula MTR_7g062220 I
OB01G32850 Oryza brachyantha OB01G32850 I
OB01G45670 Oryza brachyantha OB01G45670 I
OB03G41750 Oryza brachyantha OB03G41750 I
OB05G34770 Oryza brachyantha OB05G34770 I
OB07G10700 Oryza brachyantha OB07G10700 I
OBART01G23380 Oryza barthii OBART01G23380 I
OBART01G45510 Oryza barthii OBART01G45510 I
OBART03G34810 Oryza barthii OBART03G34810 I
OBART05G27250 Oryza barthii OBART05G27250 I
OBART07G00860 Oryza barthii OBART07G00860 I
OGLUM01G27180 Oryza glumaepatula OGLUM01G27180 I
OGLUM01G40860 Oryza glumaepatula OGLUM01G40860 I
OGLUM01G49890 Oryza glumaepatula OGLUM01G49890 I
OGLUM03G34520 Oryza glumaepatula OGLUM03G34520 I
OGLUM05G28780 Oryza glumaepatula OGLUM05G28780 I
OGLUM07G00780 Oryza glumaepatula OGLUM07G00780 I
OLONG_003355 Oryza longistaminata OLONG_003355 I
OLONG_010950 Oryza longistaminata OLONG_010950 I
OLONG_023427 Oryza longistaminata OLONG_023427 I
OMERI01G21470 Oryza meridionalis OMERI01G21470 I
OMERI01G42290 Oryza meridionalis OMERI01G42290 I
OMERI02G12480 Oryza meridionalis OMERI02G12480 I
OMERI03G31870 Oryza meridionalis OMERI03G31870 I
OMERI05G23200 Oryza meridionalis OMERI05G23200 I
ONIVA01G26380 Oryza nivara ONIVA01G26380 I
ONIVA01G51790 Oryza nivara ONIVA01G51790 I
ONIVA03G36300 Oryza nivara ONIVA03G36300 I
ONIVA10G13970 Oryza nivara ONIVA10G13970 I
ONIVA12G14120 Oryza nivara ONIVA12G14120 I
OPUNC01G23530 Oryza punctata OPUNC01G23530 I
OPUNC01G35780 Oryza punctata OPUNC01G35780 I
OPUNC01G44450 Oryza punctata OPUNC01G44450 I
OPUNC03G31830 Oryza punctata OPUNC03G31830 I
OPUNC05G24790 Oryza punctata OPUNC05G24790 I
orange1.1g038951m.g Citrus sinensis orange1.1g038951m.g I
orange1.1g045509m.g Citrus sinensis orange1.1g045509m.g I
ORGLA01G0188800 Oryza glaberrima ORGLA01G0188800 I
ORGLA01G0392700 Oryza glaberrima ORGLA01G0392700 I
ORGLA03G0318300 Oryza glaberrima ORGLA03G0318300 I
ORGLA05G0236700 Oryza glaberrima ORGLA05G0236700 I
ORGLA07G0006800 Oryza glaberrima ORGLA07G0006800 I
ORUFI01G26200 Oryza rufipogon ORUFI01G26200 I
ORUFI01G49010 Oryza rufipogon ORUFI01G49010 I
ORUFI03G36240 Oryza rufipogon ORUFI03G36240 I
ORUFI05G29210 Oryza rufipogon ORUFI05G29210 I
ORUFI07G00780 Oryza rufipogon ORUFI07G00780 I
OS01G0626400 Oryza sativa OS01G0626400 I
OS01G0972800 Oryza sativa OS01G0972800 I
OS03G0758000 Oryza sativa OS03G0758000 I
OS05G0583000 Oryza sativa OS05G0583000 I
OS07G0111400 Oryza sativa OS07G0111400 I
Pavir.Bb00073 Panicum virgatum Pavir.Bb00073 I
Pavir.Ea02224 Panicum virgatum Pavir.Ea02224 I
Pavir.Ea04136 Panicum virgatum Pavir.Ea04136 I
Pavir.Eb01898 Panicum virgatum Pavir.Eb01898 I
Pavir.J08407 Panicum virgatum Pavir.J08407 I
Pavir.J09516 Panicum virgatum Pavir.J09516 I
Pavir.J14149 Panicum virgatum Pavir.J14149 I
Pavir.J37837 Panicum virgatum Pavir.J37837 I
PDK_20s1808251g006 Phoenix dactylifera PDK_20s1808251g006 I
PGSC0003DMG400016769 Solanum tuberosum PGSC0003DMG400016769 I
PGSC0003DMG400028381 Solanum tuberosum PGSC0003DMG400028381 I
PK26982.1 Cannabis sativa PK26982.1 I
Pm002679 Prunus mume Pm002679 I
Pm006406 Prunus mume Pm006406 I
POPTR_0006s08730 Populus trichocarpa POPTR_0006s08730 I
POPTR_0008s09360 Populus trichocarpa POPTR_0008s09360 I
POPTR_0010s16760 Populus trichocarpa POPTR_0010s16760 I
POPTR_0016s10610 Populus trichocarpa POPTR_0016s10610 I
PRUPE_ppa008480mg Prunus persica PRUPE_ppa008480mg I
PRUPE_ppa019550mg Prunus persica PRUPE_ppa019550mg I
SapurV1A.0001s1670 Salix purpurea SapurV1A.0001s1670 I
SapurV1A.0176s0120 Salix purpurea SapurV1A.0176s0120 I
SapurV1A.0222s0350 Salix purpurea SapurV1A.0222s0350 I
SapurV1A.0924s0030 Salix purpurea SapurV1A.0924s0030 I
Sb01g007570 Sorghum bicolor Sb01g007570 I
Sb03g028530 Sorghum bicolor Sb03g028530 I
Sb03g039550 Sorghum bicolor Sb03g039550 I
Sb03g047350 Sorghum bicolor Sb03g047350 I
scaffold_800733.1 Arabidopsis lyrata scaffold_800733.1 I
scaffold_800734.1 Arabidopsis lyrata scaffold_800734.1 I
scaffold_9700001.1 Arabidopsis lyrata scaffold_9700001.1 I
SELMODRAFT_18136 Selaginella moellendorffii SELMODRAFT_18136 I
SELMODRAFT_29247 Selaginella moellendorffii SELMODRAFT_29247 I
SELMODRAFT_49409 Selaginella moellendorffii SELMODRAFT_49409 I
SELMODRAFT_69423 Selaginella moellendorffii SELMODRAFT_69423 I
SELMODRAFT_69431 Selaginella moellendorffii SELMODRAFT_69431 I
Si002019m.g Setaria italica Si002019m.g I
Si005025m.g Setaria italica Si005025m.g I
Si030377m.g Setaria italica Si030377m.g I
Si036692m.g Setaria italica Si036692m.g I
Solyc05g012500.2 Solanum lycopersicum Solyc05g012500.2 I
Solyc09g010960.2 Solanum lycopersicum Solyc09g010960.2 I
TCM_011578 Theobroma cacao TCM_011578 I
TCM_021911 Theobroma cacao TCM_021911 I
Thhalv10003250m.g Eutrema salsugineum Thhalv10003250m.g I
Thhalv10018976m.g Eutrema salsugineum Thhalv10018976m.g I
TRAES3BF021100090CFD_g Triticum aestivum TRAES3BF021100090CFD_g I
TRAES3BF021300010CFD_g Triticum aestivum TRAES3BF021300010CFD_g I
TRAES3BF045500040CFD_g Triticum aestivum TRAES3BF045500040CFD_g I
Traes_1BL_B15990028 Triticum aestivum Traes_1BL_B15990028 I
Traes_2AL_1B43EA59E Triticum aestivum Traes_2AL_1B43EA59E I
Traes_2BL_A69F6C5DF Triticum aestivum Traes_2BL_A69F6C5DF I
Traes_3AL_140B829CB Triticum aestivum Traes_3AL_140B829CB I
Traes_3AL_F326C5B8E Triticum aestivum Traes_3AL_F326C5B8E I
Traes_5AL_06A6F9328 Triticum aestivum Traes_5AL_06A6F9328 I
Traes_5BL_C1D6B6B74 Triticum aestivum Traes_5BL_C1D6B6B74 I
Traes_5DL_7E2053226 Triticum aestivum Traes_5DL_7E2053226 I
TRIUR3_23179 Triticum urartu TRIUR3_23179 I
TRIUR3_26868 Triticum urartu TRIUR3_26868 N
TRIUR3_35037 Triticum urartu TRIUR3_35037 I
WRKY57 Vitis vinifera VIT_01s0011g00720 I
WRKY49 Vitis vinifera VIT_08s0007g00570 I