Q00352_COPCI (Coprinopsis cinerea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Q00352_COPCI T222825_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q00352_COPCI
M02159_2.00		 Coprinopsis cinerea
TGATTGGTT
AACCAATCA		 PBM
Weirauch et al.(2014)
pTH5713		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q1WMN9_COPDI
M02204_2.00 		Coprinellus disseminatus
NNNYAATMNN
NNKATTRNNN		 PBM
Weirauch et al.(2014)
pTH5903 		0.600 0.719
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02159_2.00 Homeodomain 1 57

DNA Binding Domains

Protein ID Domain From To Sequence
Q00352_COPCI Homeodomain 148 204

Links

Other Homeodomain family TFs
Other Coprinopsis cinerea TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
22363_YPR022C Saccharomyces mikatae 22363_YPR022C I
23330_YPR022C Saccharomyces paradoxus 23330_YPR022C I
NCAS_0B04500 Naumovozyma castellii NCAS_0B04500 I
SU7_3631 Saccharomyces arboricola SU7_3631 I
YPR022C Saccharomyces cerevisiae YPR022C D