CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Sb01g028160 *(Sorghum bicolor)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	Sb01g028160	T222945_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PK24181.1 M01252_2.00	Cannabis sativa	NNNNNNNHDH	DHDNNNNNNN	PBM Lambert et al.(2019) pTH11300	0.857	0.842
ATML1 M02048_2.00	Arabidopsis thaliana	NNHNRHYRNN	NNYRDYNDNN	PBM Weirauch et al.(2014) pTH8203	0.850	0.772
ATML1 M10626_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ML1_01	0.850	0.772
HDG11 M02039_2.00	Arabidopsis thaliana	DCATTWAWKD	HMWTWAATGH	PBM Weirauch et al.(2014) pTH7664	0.841	0.789
HDG11 M06904_2.00	Arabidopsis thaliana	DCATTWAWTRH	DYAWTWAATGH	Dap-seq OMalley et al.(2016) EDT1_col	0.841	0.789
PDF2 M06921_2.00	Arabidopsis thaliana	WNVGAATATTCYHTN	NADRGAATATTCBNW	Dap-seq OMalley et al.(2016) PDF2_col	0.839	0.754
PDF2 M10625_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$PDF2_01	0.839	0.754
HDG1 M06917_2.00	Arabidopsis thaliana	DCATTAAWTRH	DYAWTTAATGH	Dap-seq OMalley et al.(2016) HDG1_col100_a	0.812	0.754
HDG1 M06918_2.00	Arabidopsis thaliana	DCATTAAWTRH	DYAWTTAATGH	Dap-seq OMalley et al.(2016) HDG1_colamp_a	0.812	0.754
ANL2 M02046_2.00	Arabidopsis thaliana	NCATTWATKNN	NNMATWAATGN	PBM Weirauch et al.(2014) pTH8244	0.797	0.754
ANL2 M06919_2.00	Arabidopsis thaliana	DCATTAAWTRH	DYAWTTAATGH	Dap-seq OMalley et al.(2016) ANL2_col_a	0.797	0.754
ANL2 M06920_2.00	Arabidopsis thaliana	DCATTAAWTRH	DYAWTTAATGH	Dap-seq OMalley et al.(2016) ANL2_colamp_a	0.797	0.754
HDG9 M10628_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$HDG9_01	0.791	0.649
HDG7 M06931_2.00	Arabidopsis thaliana	DCATTAAWTRH	DYAWTTAATGH	Dap-seq OMalley et al.(2016) HDG7_col_a	0.754	0.649
HDG7 M10629_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$HDG7_01	0.754	0.649
For this family, TFs with SR scores > 0.599* will likely have a similar motif*