CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNOG_08237
(
Phaeosphaeria nodorum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
SNOG_08237
T223522_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU09556
M02226_2.00
Neurospora crassa
TTAATWTA
TAWATTAA
PBM
Weirauch et al.(2014)
pTH8955
0.675
0.807
Q0UJ27_PHANO_CONSTRUCT
M02202_2.00
PBM CONSTRUCTS
NYAATHWNN
NNWDATTRN
PBM
Weirauch et al.(2014)
pTH6773
0.621
0.842
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNOT_08237
Homeodomain
172
229
KMKRFRLTHNQTRFLMSEFARQAHPDAAHRERLAREIPGLSPRQVQVWFQNSDDRERM
Links
Other
Homeodomain
family TFs
Other
Phaeosphaeria nodorum
TFs
102 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALUE_0000213201
Ascaris lumbricoides
ALUE_0000213201
N
0.000
AMEM016498
Anopheles merus
AMEM016498
N
0.000
GH25307
Drosophila grimshawi
FBgn0132762
N
0.000
PPAI005231
Phlebotomus papatasi
PPAI005231
N
0.000
SELMODRAFT_17503
Selaginella moellendorffii
SELMODRAFT_17503
N
0.000
TRE_0002065801
Trichobilharzia regenti
TRE_0002065801
N
0.000