Traes_2AL_CC3E5591E (Triticum aestivum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Traes_2AL_CC3E5591E T224128_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_gwp_gw1.C_70211
M02220_2.00 		Physcomitrella patens
HMATNANDNN
NNHNTNATKD		 PBM
Weirauch et al.(2014)
pTH8489 		0.713 0.625
HB-5
M06924_2.00 		Arabidopsis thaliana
NNAHCAATWATTKDNNNHWWH
DWWDNNNHMAATWATTGDTNN		 Dap-seq
OMalley et al.(2016)
ATHB40_col_a 		0.696 0.696
HB-5
M06925_2.00 		Arabidopsis thaliana
HHAATWATTGDWNN
NNWHCAATWATTDD		 Dap-seq
OMalley et al.(2016)
ATHB40_colamp_a 		0.696 0.696
ATHB-21
M06907_2.00 		Arabidopsis thaliana
NNWHCAATWATTDN
NHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB21_col_a 		0.696 0.643
ATHB-21
M06908_2.00 		Arabidopsis thaliana
WWDDNNNHAATWATTGDTNN
NNAHCAATWATTDNNNHHWW		 Dap-seq
OMalley et al.(2016)
ATHB21_colamp_a 		0.696 0.643
ATHB-53
M06934_2.00 		Arabidopsis thaliana
HMAATAATTRD
HYAATTATTKD		 Dap-seq
OMalley et al.(2016)
ATHB53_col_a 		0.691 0.679
ATHB-53
M06935_2.00 		Arabidopsis thaliana
NNWHCAATWATTDDN
NHHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB53_colamp_a 		0.691 0.679
ATHB-13
M06900_2.00 		Arabidopsis thaliana
HYAATAATTDD
HHAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB13_col_a 		0.683 0.554
ATHB-13
M06901_2.00 		Arabidopsis thaliana
NYAATAATTRW
WYAATTATTRN		 Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a 		0.683 0.554
ATHB-6
M02040_2.00 		Arabidopsis thaliana
HATNATTDN
NHAATNATD		 PBM
Weirauch et al.(2014)
pTH7670 		0.681 0.625
ATHB-6
M06909_2.00 		Arabidopsis thaliana
NNNHATKATTR
YAATMATDNNN		 Dap-seq
OMalley et al.(2016)
ATHB6_col_a 		0.681 0.625
ATHB-6
M06910_2.00 		Arabidopsis thaliana
NCAATAATTRN
NYAATTATTGN		 Dap-seq
OMalley et al.(2016)
ATHB6_colamp_a 		0.681 0.625
ATHB-16
M02050_2.00 		Arabidopsis thaliana
YAATMATT
AATKATTR		 PBM
Weirauch et al.(2014)
pTH7270 		0.681 0.607
HAT5
M06914_2.00 		Arabidopsis thaliana
NHAATAATTDW
WHAATTATTDN		 Dap-seq
OMalley et al.(2016)
HAT5_col_a 		0.669 0.643
HAT5
M06915_2.00 		Arabidopsis thaliana
WNYAATAATTRWDN
NHWYAATTATTRNW		 Dap-seq
OMalley et al.(2016)
HAT5_colamp_a 		0.669 0.643
HAT5
M02683_2.00 		Arabidopsis thaliana
SCAATAATTNNV
BNNAATTATTGS		 SELEX
Mathelier et al.(2014)
MA0008.2 		0.669 0.643
HAT5
M10624_2.00 		Arabidopsis thaliana
YSCAATAATTNNVN
NBNNAATTATTGSR		 Transfac
Matys et al.(2006)
P$ATHB1_01 		0.669 0.643
ATHB-5
M06932_2.00 		Arabidopsis thaliana
NYAATMATTND
HNAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_col_a 		0.663 0.607
ATHB-5
M06933_2.00 		Arabidopsis thaliana
NYAATMATTN
NAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a 		0.663 0.607
ATHB-5
M02684_2.00 		Arabidopsis thaliana
CAATVATTGVVSV
BSBBCAATBATTG		 SELEX
Mathelier et al.(2014)
MA0110.2 		0.663 0.607
ATHB-5
M10630_2.00 		Arabidopsis thaliana
CAATVATTG
CAATBATTG		 Transfac
Matys et al.(2006)
P$ATHB5_01 		0.663 0.607
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_2AL_CC3E5591E.1 Homeodomain 57 112

Links

Other Homeodomain family TFs
Other Triticum aestivum TFs

724 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_079180 Acremonium chrysogenum ACRE_079180 I 0.000
BBA_04449 Beauveria bassiana BBA_04449 I 0.000
Bcin07g02960 Botrytis cinerea Bcin07g02960 I 0.000
BOTBODRAFT_92498 Botryobasidium botryosum BOTBODRAFT_92498 I 0.000
CCM_07005 Cordyceps militaris CCM_07005 I 0.000
CFIO01_10932 Colletotrichum fioriniae CFIO01_10932 I 0.000
CGGC5_4872 Colletotrichum gloeosporioides CGGC5_4872 I 0.000
CH063_09324 Colletotrichum higginsianum CH063_09324 I 0.000
CHGG_05891 Chaetomium globosum CHGG_05891 I 0.000
CMQ_8013 Grosmannia clavigera CMQ_8013 I 0.000
Cob_08105 Colletotrichum orbiculare Cob_08105 I 0.000
CPUR_03253 Claviceps purpurea CPUR_03253 I 0.000
CSUB01_03838 Colletotrichum sublineola CSUB01_03838 I 0.000
CTHT_0009000 Chaetomium thermophilum CTHT_0009000 I 0.000
estExt_fgenesh1_pm.C_140003 Cryphonectria parasitica estExt_fgenesh1_pm.C_140003 I 0.000
estExt_Genewise1.C_40527 Neurospora discreta estExt_Genewise1.C_40527 I 0.000
F503_01009 Ophiostoma piceae uamh F503_01009 I 0.000
FFUJ_01365 Fusarium fujikuroi FFUJ_01365 I 0.000
FGRRES_15831 Fusarium graminearum FGRRES_15831 I 0.000
FOXG_00218 Fusarium oxysporum FOXG_00218 I 0.000
FPSE_02604 Fusarium pseudograminearum FPSE_02604 I 0.000
FVEG_01300 Fusarium verticillioides FVEG_01300 I 0.000
GGTG_04163 Gaeumannomyces graminis GGTG_04163 I 0.000
GLRG_04053 Colletotrichum graminicola GLRG_04053 I 0.000
HMPREF1624_03694 Sporothrix schenckii HMPREF1624_03694 I 0.000
MAC_04202 Metarhizium acridum MAC_04202 I 0.000
MAJ_02156 Metarhizium majus MAJ_02156 I 0.000
MAM_07644 Metarhizium album MAM_07644 I 0.000
MANI_024675 Metarhizium anisopliae MANI_024675 I 0.000
MAPG_00558 Magnaporthe poae MAPG_00558 I 0.000
MBR_03633 Metarhizium brunneum MBR_03633 I 0.000
MGG_10837 Magnaporthe oryzae MGG_10837 I 0.000
MGU_04823 Metarhizium guizhouense MGU_04823 I 0.000
MYCTH_2296905 Myceliophthora thermophila MYCTH_2296905 I 0.000
NCU02957 Neurospora crassa NCU02957 D 0.000
NEUTE1DRAFT_150703 Neurospora tetrasperma NEUTE1DRAFT_150703 I 0.000
OIDMADRAFT_110480 Oidiodendron maius OIDMADRAFT_110480 I 0.000
OIDMADRAFT_57256 Oidiodendron maius OIDMADRAFT_57256 I 0.000
PODANS_1_18420 Podospora anserina PODANS_1_18420 I 0.000
S40285_00887 Stachybotrys chlorohalonata S40285_00887 I 0.000
S40288_08146 Stachybotrys chartarum S40288_08146 I 0.000
SAPIO_CDS5040 Scedosporium apiospermum SAPIO_CDS5040 I 0.000
SBOR_5241 Sclerotinia borealis SBOR_5241 I 0.000
SMAC_00493 Sordaria macrospora SMAC_00493 I 0.000
SPBR_01576 Sporothrix brasiliensis SPBR_01576 I 0.000
SS1G_01995 Sclerotinia sclerotiorum SS1G_01995 I 0.000
THITE_2112332 Thielavia terrestris THITE_2112332 I 0.000
TRIATDRAFT_299973 Trichoderma atroviride TRIATDRAFT_299973 I 0.000
TRIREDRAFT_122371 Trichoderma reesei TRIREDRAFT_122371 I 0.000
TRIVIDRAFT_35604 Trichoderma virens TRIVIDRAFT_35604 I 0.000
UV8b_5697 Ustilaginoidea virens UV8b_5697 I 0.000
VDAG_03292 Verticillium dahliae VDAG_03292 I 0.000
VDBG_06134 Verticillium alfalfae VDBG_06134 I 0.000
VDBG_06134 Verticillium albo atrum VDBG_06134 I 0.000
VHEMI06417 Torrubiella hemipterigena VHEMI06417 I 0.000
X797_003690 Metarhizium robertsii X797_003690 I 0.000