CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
VDBG_02075
(
Verticillium alfalfae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
VDBG_02075
T224484_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY15966
Homeodomain
20
78
KVGTRFSTRALRVLRNWFAAHEDHPYPRAGDMESLQAQTGLNKLQVSTWLANTRRRTKS
Links
Other
Homeodomain
family TFs
Other
Verticillium alfalfae
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG018001.1
Alligator sinensis
Alligator_sinensis_CCG018001.1
I
DBP
Anolis carolinensis
ENSACAG00000015667
I
ENSAMXG00000009417
Astyanax mexicanus
ENSAMXG00000009417
I
ENSAMXG00000016053
Astyanax mexicanus
ENSAMXG00000016053
I
dbpb
Danio rerio
ENSDARG00000057652
N
hlfb
Danio rerio
ENSDARG00000061011
I
dbpa
Danio rerio
ENSDARG00000063014
I
ENSGACG00000010676
Gasterosteus aculeatus
ENSGACG00000010676
I
ENSGMOG00000004797
Gadus morhua
ENSGMOG00000004797
N
ENSLACG00000006062
Latimeria chalumnae
ENSLACG00000006062
I
ENSONIG00000007041
Oreochromis niloticus
ENSONIG00000007041
I
ENSONIG00000012778
Oreochromis niloticus
ENSONIG00000012778
I
ENSORLG00000011412
Oryzias latipes
ENSORLG00000011412
I
ENSPFOG00000007430
Poecilia formosa
ENSPFOG00000007430
I
ENSPFOG00000010189
Poecilia formosa
ENSPFOG00000010189
I
ENSTNIG00000004400
Tetraodon nigroviridis
ENSTNIG00000004400
I
ENSTNIG00000008098
Tetraodon nigroviridis
ENSTNIG00000008098
I
hlfa
Tetraodon nigroviridis
ENSTNIG00000011274
I
hlfa
Takifugu rubripes
ENSTRUG00000003731
I
ENSTRUG00000003893
Takifugu rubripes
ENSTRUG00000003893
I
ENSTRUG00000007098
Takifugu rubripes
ENSTRUG00000007098
I
ENSXMAG00000012054
Xiphophorus maculatus
ENSXMAG00000012054
I
ENSXMAG00000014158
Xiphophorus maculatus
ENSXMAG00000014158
I
HMEL014752
Heliconius melpomene
HMEL014752
N
Ogr12886
Ophisaurus gracilis
Ogr12886
I
Pvit_12136
Pogona vitticeps
Pvit_12136
I
dbp
Xenopus tropicalis
XB-GENE-5995286
I
dbp.L
Xenopus laevis
XB-GENE-6256610
I
hlf
Xenopus tropicalis
XB-GENE-955698
I
tef
Xenopus tropicalis
XB-GENE-962732
I
tef.S
Xenopus laevis
XB-GENE-962737
I
XP_002937859
Xenopus tropicalis
XP_002937859
I