Cla000910 (Citrullus lanatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Cla000910 T225567_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.866 0.929
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.866 0.929
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.866 0.929
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.862 0.982
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.862 0.982
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla000910 Homeodomain 16 75

Links

Other Homeodomain family TFs
Other Citrullus lanatus TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB04375.1 Alternaria brassicicola AB04375.1 I 0.000
AOL_s00054g326 Arthrobotrys oligospora AOL_s00054g326 I 0.000
Bcin10g03410 Botrytis cinerea Bcin10g03410 I 0.000
ANIA_04077 Aspergillus nidulans CADANIAG00004604 I 0.000
ATEG_03075 Aspergillus terreus CADATEAG00010055 I 0.000
NFIA_019220 Neosartorya fischeri CADNFIAG00000884 I 0.000
CFIO01_11469 Colletotrichum fioriniae CFIO01_11469 I 0.000
CGGC5_5606 Colletotrichum gloeosporioides CGGC5_5606 I 0.000
CH063_07180 Colletotrichum higginsianum CH063_07180 I 0.000
CHGG_02890 Chaetomium globosum CHGG_02890 I 0.000
CIMG_03917 Coccidioides immitis CIMG_03917 I 0.000
CMQ_7525 Grosmannia clavigera CMQ_7525 N 0.000
Cob_12532 Colletotrichum orbiculare Cob_12532 I 0.000
COCC4DRAFT_126547 Bipolaris maydis COCC4DRAFT_126547 I 0.000
COCCADRAFT_37717 Bipolaris zeicola COCCADRAFT_37717 I 0.000
COCMIDRAFT_84665 Bipolaris oryzae COCMIDRAFT_84665 I 0.000
COCSADRAFT_102727 Bipolaris sorokiniana COCSADRAFT_102727 I 0.000
COCVIDRAFT_34345 Bipolaris victoriae COCVIDRAFT_34345 I 0.000
CPC735_004330 Coccidioides posadasii CPC735_004330 I 0.000
CSUB01_07980 Colletotrichum sublineola CSUB01_07980 I 0.000
CTHT_0024110 Chaetomium thermophilum CTHT_0024110 I 0.000
DOTSEDRAFT_68166 Dothistroma septosporum DOTSEDRAFT_68166 I 0.000
DRE_01415 Drechslerella stenobrocha DRE_01415 I 0.000
EPUS_04985 Endocarpon pusillum EPUS_04985 I 0.000
estExt_Genewise1.C_50564 Neurospora discreta estExt_Genewise1.C_50564 I 0.000
EURHEDRAFT_458005 Aspergillus ruber EURHEDRAFT_458005 I 0.000
e_gw1.00129.236.1 Aspergillus carbonarius e_gw1.00129.236.1 I 0.000
F503_07914 Ophiostoma piceae uamh F503_07914 I 0.000
fgenesh1_pg.C_scaffold_1000989 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000989 I 0.000
GLRG_03674 Colletotrichum graminicola GLRG_03674 I 0.000
H072_1719 Dactylellina haptotyla H072_1719 I 0.000
H101_07436 Trichophyton interdigitale H101_07436 N 0.000
H102_07847 Trichophyton rubrum H102_07847 N 0.000
H105_07872 Trichophyton soudanense H105_07872 N 0.000
HCBG_06971 Histoplasma capsulatum HCBG_06971 I 0.000
HMPREF1624_06509 Sporothrix schenckii HMPREF1624_06509 N 0.000
LEMA_P018010.1 Leptosphaeria maculans LEMA_P018010.1 I 0.000
M437DRAFT_83473 Aureobasidium melanogenum M437DRAFT_83473 I 0.000
M438DRAFT_281095 Aureobasidium pullulans M438DRAFT_281095 I 0.000
MCYG_00903 Arthroderma otae MCYG_00903 I 0.000
MCYG_00903 Microsporum canis MCYG_00903 I 0.000
MPH_05713 Macrophomina phaseolina MPH_05713 I 0.000
MYCTH_2304200 Myceliophthora thermophila MYCTH_2304200 I 0.000
NCU00392 Neurospora crassa NCU00392 D 0.000
NEUTE1DRAFT_137852 Neurospora tetrasperma NEUTE1DRAFT_137852 I 0.000
OIDMADRAFT_60194 Oidiodendron maius OIDMADRAFT_60194 I 0.000
PAAG_08645 Paracoccidioides sp lutzii PAAG_08645 I 0.000
PABG_02907 Paracoccidioides brasiliensis PABG_02907 I 0.000
Pc18g02200 Penicillium chrysogenum Pc18g02200 I 0.000
PCH_Pc18g02200 Penicillium rubens PCH_Pc18g02200 I 0.000
PDE_02765 Penicillium oxalicum PDE_02765 I 0.000
PDIP_73930 Penicillium digitatum PDIP_73930 I 0.000
PEX1_076370 Penicillium expansum PEX1_076370 I 0.000
PFICI_03782 Pestalotiopsis fici PFICI_03782 I 0.000
PITC_027910 Penicillium italicum PITC_027910 I 0.000
PMAA_024740 Penicillium marneffei PMAA_024740 I 0.000
PMAA_024740 Talaromyces marneffei PMAA_024740 I 0.000
PODANS_7_2090 Podospora anserina PODANS_7_2090 I 0.000
PTRG_00243 Pyrenophora triticirepentis PTRG_00243 I 0.000
PTT_13020 Pyrenophora teres PTT_13020 I 0.000
PV09_02665 Verruconis gallopava PV09_02665 I 0.000
PVAR5_6448 Byssochlamys spectabilis PVAR5_6448 I 0.000
SBOR_2000 Sclerotinia borealis SBOR_2000 I 0.000
SETTUDRAFT_102560 Setosphaeria turcica SETTUDRAFT_102560 I 0.000
SMAC_08830 Sordaria macrospora SMAC_08830 I 0.000
SNOG_11811 Phaeosphaeria nodorum SNOG_11811 I 0.000
SPBR_00313 Sporothrix brasiliensis SPBR_00313 N 0.000
SS1G_06977 Sclerotinia sclerotiorum SS1G_06977 I 0.000
TEQG_01462 Trichophyton equinum TEQG_01462 N 0.000
THITE_2119520 Thielavia terrestris THITE_2119520 I 0.000
TSTA_033430 Talaromyces stipitatus TSTA_033430 I 0.000
U727_00431293291 Penicillium solitum U727_00431293291 I 0.000
UCRNP2_6191 Neofusicoccum parvum UCRNP2_6191 I 0.000
VDAG_06431 Verticillium dahliae VDAG_06431 I 0.000
W97_02650 Coniosporium apollinis W97_02650 I 0.000