CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla017771
(
Citrullus lanatus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Cla017771
T225613_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla017771
Homeodomain
1
40
MVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRR
Links
Other
Homeodomain
family TFs
Other
Citrullus lanatus
TFs
155 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC233850.1_FG005
Zea mays
AC233850.1_FG005
I
0.000
BGIOSGA006304
Oryza indica
BGIOSGA006304
I
0.000
Bo9g106030
Brassica oleracea
Bo9g106030
I
0.000
Bra002398
Brassica rapa
Bra002398
I
0.000
cgd1_1560
Cryptosporidium parvum
cgd1_1560
N
0.000
Cla018710
Citrullus lanatus
Cla018710
I
0.000
CMU_036300
Cryptosporidium muris
CMU_036300
I
0.000
Contig21974.0.g77
Oxytricha trifallax
Contig21974.0.g77
I
0.000
Cucsa.083720
Cucumis sativus
Cucsa.083720
I
0.000
DME_0000454601
Dracunculus medinensis
DME_0000454601
I
0.000
e_gw1.364.12.1
Physcomitrella patens
e_gw1.364.12.1
I
0.000
F775_07838
Aegilops tauschii
F775_07838
I
0.000
fgenesh2_pg.2_#_1160
Fragilariopsis cylindrus
fgenesh2_pg.2_#_1160
I
0.000
maker-piw_contig_136-snap-gene-0.25
Pythium iwayamai
maker-piw_contig_136-snap-gene-0.25
I
0.000
OB02G27210
Oryza brachyantha
OB02G27210
I
0.000
OBART02G19430
Oryza barthii
OBART02G19430
I
0.000
OGLUM02G19730
Oryza glumaepatula
OGLUM02G19730
I
0.000
OLONG_023990
Oryza longistaminata
OLONG_023990
I
0.000
OMERI02G19320
Oryza meridionalis
OMERI02G19320
I
0.000
ONIVA02G21500
Oryza nivara
ONIVA02G21500
I
0.000
OPUNC02G17370
Oryza punctata
OPUNC02G17370
I
0.000
ORGLA02G0166600
Oryza glaberrima
ORGLA02G0166600
I
0.000
ORUFI02G20490
Oryza rufipogon
ORUFI02G20490
I
0.000
OS02G0537500
Oryza sativa
OS02G0537500
I
0.000
OSTLU_119601
Ostreococcus lucimarinus
OSTLU_119601
I
0.000
Pavir.Ab01863
Panicum virgatum
Pavir.Ab01863
I
0.000
Pavir.Ga01887
Panicum virgatum
Pavir.Ga01887
I
0.000
Pavir.J29330
Panicum virgatum
Pavir.J29330
I
0.000
Pavir.J38646
Panicum virgatum
Pavir.J38646
I
0.000
Ppa-efl-2
Pristionchus pacificus
PPA00217
I
0.000
Sb04g021970
Sorghum bicolor
Sb04g021970
I
0.000
scaffold491-EXSNAP2012.7
Pristionchus exspectatus
scaffold491-EXSNAP2012.7
I
0.000
Si017108m.g
Setaria italica
Si017108m.g
I
0.000
Traes_2AL_8EC530273
Triticum aestivum
Traes_2AL_8EC530273
I
0.000
Traes_2BL_1E7B7A8CA
Triticum aestivum
Traes_2BL_1E7B7A8CA
I
0.000
Traes_2DL_BD8048C15
Triticum aestivum
Traes_2DL_BD8048C15
I
0.000
TRE_0001857001
Trichobilharzia regenti
TRE_0001857001
I
0.000