Cmyd_10012400 (Chelonia mydas)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Cmyd_10012400 T225731_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HESX1
M03187_2.00 		Homo sapiens
NHTAATTRVH
DBYAATTADN		 SELEX
Jolma et al.(2013)
HESX1_1 		0.656 0.237
HESX1
M03188_2.00 		Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN		 SELEX
Jolma et al.(2013)
HESX1_2 		0.656 0.237
HESX1
M05227_2.00 		Homo sapiens
DYAATTRV
BYAATTRH		 SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX 		0.656 0.237
HESX1
M05228_2.00 		Homo sapiens
NYAATTRD
HYAATTRN		 SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX 		0.656 0.237
NOBOX
M09135_2.00 		Homo sapiens
HTAATTRVB
VBYAATTAD		 Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C 		0.621 0.441
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10012400 Homeodomain 3165 3210
Cmyd_10012400 Homeodomain 3230 3242

Links

Other Homeodomain family TFs
Other Chelonia mydas TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_079170 Acremonium chrysogenum ACRE_079170 N
BBA_04448 Beauveria bassiana BBA_04448 N
NFIA_003270 Neosartorya fischeri CADNFIAG00000089 N
CFIO01_10935 Colletotrichum fioriniae CFIO01_10935 N
CH063_07408 Colletotrichum higginsianum CH063_07408 N
Cob_08103 Colletotrichum orbiculare Cob_08103 N
CSUB01_03837 Colletotrichum sublineola CSUB01_03837 N
FFUJ_01364 Fusarium fujikuroi FFUJ_01364 N
fgenesh1_pm.sca_1_chr1_3_0000112 Nectria haematococca fgenesh1_pm.sca_1_chr1_3_0000112 N
FGRRES_01172 Fusarium graminearum FGRRES_01172 N
FOXG_00219 Fusarium oxysporum FOXG_00219 N
FPSE_02603 Fusarium pseudograminearum FPSE_02603 N
FVEG_01299 Fusarium verticillioides FVEG_01299 N
GLRG_04054 Colletotrichum graminicola GLRG_04054 N
MAC_04201 Metarhizium acridum MAC_04201 N
MAJ_02155 Metarhizium majus MAJ_02155 N
MANI_024672 Metarhizium anisopliae MANI_024672 N
MBR_03632 Metarhizium brunneum MBR_03632 N
MGU_04822 Metarhizium guizhouense MGU_04822 N
NechaG89979 Fusarium solani NechaG89979 N
OCS_04252 Ophiocordyceps sinensis OCS_04252 N
S40285_00886 Stachybotrys chlorohalonata S40285_00886 N
S40288_08147 Stachybotrys chartarum S40288_08147 N
TRIREDRAFT_78895 Trichoderma reesei TRIREDRAFT_78895 N
TRIVIDRAFT_35417 Trichoderma virens TRIVIDRAFT_35417 N
UV8b_5696 Ustilaginoidea virens UV8b_5696 N
VHEMI06418 Torrubiella hemipterigena VHEMI06418 N
X797_003689 Metarhizium robertsii X797_003689 N