Ogr03859 (Ophisaurus gracilis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ogr03859 T226493_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HESX1
M03187_2.00 		Homo sapiens
NHTAATTRVH
DBYAATTADN		 SELEX
Jolma et al.(2013)
HESX1_1 		0.732 0.412
HESX1
M03188_2.00 		Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN		 SELEX
Jolma et al.(2013)
HESX1_2 		0.732 0.412
HESX1
M05227_2.00 		Homo sapiens
DYAATTRV
BYAATTRH		 SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX 		0.732 0.412
HESX1
M05228_2.00 		Homo sapiens
NYAATTRD
HYAATTRN		 SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX 		0.732 0.412
NOBOX
M09135_2.00 		Homo sapiens
HTAATTRVB
VBYAATTAD		 Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C 		0.668 0.529
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr03859 Homeodomain 52 69
Ogr03859 Homeodomain 105 120

Links

Other Homeodomain family TFs
Other Ophisaurus gracilis TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CANTEDRAFT_115344 Candida tenuis CANTEDRAFT_115344 N
estExt_fgenesh1_pg.C_chr_1.20168 Pichia stipitis estExt_fgenesh1_pg.C_chr_1.20168 N
GNLVRS01_PISO0E10256g Millerozyma farinosa GNLVRS01_PISO0E10256g N
LELG_03400 Lodderomyces elongisporus LELG_03400 N
PGUG_03219 Candida guilliermondii PGUG_03219 N
PGUG_03219 Meyerozyma guilliermondii PGUG_03219 N
PGUG_04373 Candida guilliermondii PGUG_04373 N
PGUG_04373 Meyerozyma guilliermondii PGUG_04373 N
PICST_66620 Scheffersomyces stipitis PICST_66620 N
SAKL0B05434g Lachancea kluyveri SAKL0B05434g N
SPAPADRAFT_62218 Spathaspora passalidarum SPAPADRAFT_62218 N