CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Q86SD7_PODCA
(
Podocoryne carnea
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Q86SD7_PODCA
T226947_2.00
HughesLab (2013-Jun-13)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q86SD7_PODCA
M02213_2.00
Podocoryne carnea
NNTAATTADN
NHTAATTANN
PBM
Weirauch et al.(2014)
pTH6136
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02213_2.00
Homeodomain
1
57
RRKRSCFDAKQVKAMEKEFSQKKYISYEERIKLSETLQLDESQIKIWFQNRRAKGKK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Q86SD7_PODCA
Homeodomain
134
190
RRKRSCFDAKQVKAMEKEFSQKKYISYEERIKLSETLQLDESQIKIWFQNRRAKGKK
Links
Other
Homeodomain
family TFs
Other
Podocoryne carnea
TFs
80 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0001224701
Anisakis simplex
ASIM_0001224701
I
0.642
A_02406
Schistosoma haematobium
A_02406
I
0.636
BN946_scf184355.g3
Trametes cinnabarina
BN946_scf184355.g3
I
0.686
BOTBODRAFT_273374
Botryobasidium botryosum
BOTBODRAFT_273374
I
0.635
BTMF_0000368801
Brugia timori
BTMF_0000368801
I
0.608
BXY_0622200
Bursaphelenchus xylophilus
BXY_0622200
I
0.647
CC1G_12380
Coprinopsis cinerea
CC1G_12380
I
0.605
csin102876
Clonorchis sinensis
csin102876
I
0.636
CY34DRAFT_634996
Suillus luteus
CY34DRAFT_634996
I
0.636
D915_05896
Fasciola hepatica
D915_05896
I
0.636
DACRYDRAFT_114058
Dacryopinax sp
DACRYDRAFT_114058
I
0.635
DICSQDRAFT_44553
Dichomitus squalens
DICSQDRAFT_44553
I
0.634
DILT_0000534401
Diphyllobothrium latum
DILT_0000534401
I
0.636
ECANG7_06581
Echinococcus canadensis
ECANG7_06581
I
0.614
ECPE_0001225801
Echinostoma caproni
ECPE_0001225801
I
0.630
EmuJ_000915650
Echinococcus multilocularis
EmuJ_000915650
I
0.614
ENSLACG00000015207
Latimeria chalumnae
ENSLACG00000015207
I
0.614
ENSONIG00000018347
Oreochromis niloticus
ENSONIG00000018347
I
0.660
fgenesh1_pg.C_scaffold_7000173
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_7000173
I
0.635
FIBRA_06885
Fibroporia radiculosa
FIBRA_06885
I
0.635
FOMPIDRAFT_1135811
Fomitopsis pinicola
FOMPIDRAFT_1135811
I
0.635
GALMADRAFT_67940
Galerina marginata
GALMADRAFT_67940
I
0.635
GLOTRDRAFT_62830
Gloeophyllum trabeum
GLOTRDRAFT_62830
I
0.635
GYMLUDRAFT_72414
Gymnopus luxurians
GYMLUDRAFT_72414
I
0.603
HelroG128720
Helobdella robusta
HelroG128720
I
0.604
HelroG138724
Helobdella robusta
HelroG138724
I
0.659
HETIRDRAFT_316855
Heterobasidion irregulare
HETIRDRAFT_316855
I
0.636
HMEL025049
Heliconius melpomene
HMEL025049
I
0.667
JAAARDRAFT_435587
Jaapia argillacea
JAAARDRAFT_435587
I
0.635
JL09_g3549
Pichia kudriavzevii
JL09_g3549
I
0.607
K443DRAFT_118259
Laccaria amethystina
K443DRAFT_118259
I
0.635
KGM_13131
Danaus plexippus
KGM_13131
I
0.627
L596_g14232
Steinernema carpocapsae
L596_g14232
I
0.674
L889_g7378
Steinernema feltiae
L889_g7378
I
0.674
L898_g2678
Steinernema monticolum
L898_g2678
I
0.674
LACBIDRAFT_297319
Laccaria bicolor
LACBIDRAFT_297319
I
0.635
M404DRAFT_929271
Pisolithus tinctorius
M404DRAFT_929271
I
0.635
M408DRAFT_329958
Serendipita vermifera
M408DRAFT_329958
I
0.636
M413DRAFT_28906
Hebeloma cylindrosporum
M413DRAFT_28906
I
0.625
MCINX005605
Melitaea cinxia
MCINX005605
I
0.634
ML014416a
Mnemiopsis leidyi
ML014416a
I
0.608
nRc.2.0.1.g30457
Romanomermis culicivorax
nRc.2.0.1.g30457
I
0.622
Ocbimv22023837m.g
Octopus bimaculoides
Ocbimv22023837m.g
I
0.652
OFLC_0000560901
Onchocerca flexuosa
OFLC_0000560901
I
0.608
PAXINDRAFT_12861
Paxillus involutus
PAXINDRAFT_12861
I
0.635
PAXRUDRAFT_210495
Paxillus rubicundulus
PAXRUDRAFT_210495
I
0.635
PHLGIDRAFT_100262
Phlebiopsis gigantea
PHLGIDRAFT_100262
I
0.635
PHLGIDRAFT_10905
Phlebiopsis gigantea
PHLGIDRAFT_10905
I
0.667
PIIN_06801
Piriformospora indica
PIIN_06801
I
0.635
PILCRDRAFT_6622
Piloderma croceum
PILCRDRAFT_6622
I
0.636
PISMIDRAFT_97497
Pisolithus microcarpus
PISMIDRAFT_97497
I
0.635
PLEOSDRAFT_1011447
Pleurotus ostreatus
PLEOSDRAFT_1011447
I
0.603
PLICRDRAFT_366051
Plicaturopsis crispa
PLICRDRAFT_366051
I
0.635
PTRK_0000181700
Parastrongyloides trichosuri
PTRK_0000181700
I
0.626
PUNSTDRAFT_128149
Punctularia strigosozonata
PUNSTDRAFT_128149
I
0.635
PXEA_0002165701
Protopolystoma xenopodis
PXEA_0002165701
I
0.636
SCLCIDRAFT_793812
Scleroderma citrinum
SCLCIDRAFT_793812
I
0.635
SCUD_0001655801
Schistosoma curassoni
SCUD_0001655801
I
0.636
SERLA73DRAFT_90145
Serpula lacrymans
SERLA73DRAFT_90145
I
0.636
Sjc_0105010
Schistosoma japonicum
Sjc_0105010
I
0.636
SMRZ_0000721601
Schistosoma margrebowiei
SMRZ_0000721601
I
0.636
SMTD_0002243101
Schistosoma mattheei
SMTD_0002243101
I
0.636
SMU15012780
Schmidtea mediterranea
SMU15012780
I
0.638
SMU15037895
Schmidtea mediterranea
SMU15037895
I
0.638
SPAL_0000498200
Strongyloides papillosus
SPAL_0000498200
I
0.626
SPER_0001880401
Spirometra erinaceieuropaei
SPER_0001880401
I
0.636
SPER_0003105501
Spirometra erinaceieuropaei
SPER_0003105501
I
0.636
SPPG_03702
Spizellomyces punctatus
SPPG_03702
I
0.600
SSLN_0001304301
Schistocephalus solidus
SSLN_0001304301
I
0.636
SSTP_0000092200
Strongyloides stercoralis
SSTP_0000092200
I
0.630
T265_09780
Opisthorchis viverrini
T265_09780
I
0.636
TASK_0000469001
Taenia asiatica
TASK_0000469001
I
0.638
TCNE_0000477301
Toxocara canis
TCNE_0000477301
I
0.608
TsM_000611800
Taenia solium
TsM_000611800
I
0.638
TsM_000892700
Taenia solium
TsM_000892700
I
0.638
TTAC_0000772301
Hydatigera taeniaeformis
TTAC_0000772301
I
0.608
TTAC_0000915701
Hydatigera taeniaeformis
TTAC_0000915701
I
0.636
V565_069290
Rhizoctonia solani
V565_069290
I
0.635
VICG_01325
Vittaforma corneae
VICG_01325
I
0.602
WUBG_06106
Wuchereria bancrofti
WUBG_06106
I
0.608