cassava27173.m1 (Manihot esculenta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 cassava27173.m1 T227086_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MTR_2g038000
M02141_2.00 		Medicago truncatula
NDNYWNNNNN
NNNNNWRNHN		 PBM
Weirauch et al.(2014)
pTH6339 		0.604 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava27173.m1 Homeodomain 507 563

Links

Other Homeodomain family TFs
Other Manihot esculenta TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000006227 Ailuropoda melanoleuca ENSAMEG00000006227 I
PRDM14 Bos taurus ENSBTAG00000000060 I
ENSBTAP00000000066-D1 Bos grunniens ENSBTAP00000000066-D1 I
PRDM14 Canis familiaris ENSCAFG00000007696 I
PRDM14 Cavia porcellus ENSCPOG00000027176 I
ENSCSAG00000013856 Chlorocebus sabaeus ENSCSAG00000013856 I
ENSDNOG00000014500 Dasypus novemcinctus ENSDNOG00000014500 I
PRDM14 Equus caballus ENSECAG00000014777 I
ENSFCAG00000001436 Felis catus ENSFCAG00000001436 I
PRDM14 Homo sapiens ENSG00000147596 D
PRDM14 Gorilla gorilla ENSGGOG00000011363 I
ENSMMUG00000014191 Macaca mulatta ENSMMUG00000014191 I
ENSMPUG00000010629 Mustela putorius furo ENSMPUG00000010629 I
ENSOARG00000003528 Ovis aries ENSOARG00000003528 I
ENSP00000276594 Macaca fascicularis ENSP00000276594 I
ENSPANG00000024378 Papio anubis ENSPANG00000024378 I
ENSPPYG00000018658 Pongo abelii ENSPPYG00000018658 I
PRDM14 Pan troglodytes ENSPTRG00000020331 I
ENSTSYG00000010610 Tarsius syrichta ENSTSYG00000010610 I