CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.081360
(
Cucumis sativus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Cucsa.081360
T227172_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.081360.1
Homeodomain
501
553
FRIPRHAVEKLRKVFADNELPSRDVKENLSKELGLDAEKVSKWFKNARYSALR
Cucsa.081360.2
Homeodomain
498
550
FRIPRHAVEKLRKVFADNELPSRDVKENLSKELGLDAEKVSKWFKNARYSALR
Links
Other
Homeodomain
family TFs
Other
Cucumis sativus
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29671.m000294
Ricinus communis
29671.m000294
I
0.602
cassava27173.m1
Manihot esculenta
cassava27173.m1
I
0.602
Cla019142
Citrullus lanatus
Cla019142
N
0.867
GLYMA09G06730
Glycine max
GLYMA09G06730
I
0.602
GLYMA15G17956
Glycine max
GLYMA15G17956
I
0.666
PK03141.1
Cannabis sativa
PK03141.1
N
0.625
Pm008905
Prunus mume
Pm008905
I
0.605
PRUPE_ppa023964mg
Prunus persica
PRUPE_ppa023964mg
I
0.605