CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_1150041
(
Physcomitrella patens
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
estExt_fgenesh2_pg.C_1150041
T227359_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_1150041
Homeodomain
45
104
PAQRGQLPERAVAILRRWMFEHFLNPYPALEEKCFLARKTGLTRQKVSNWFINARVRLWK
Links
Other
Homeodomain
family TFs
Other
Physcomitrella patens
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.395170
Cucumis sativus
Cucsa.395170
N
0.706
F775_15912
Aegilops tauschii
F775_15912
N
0.600
fgeneshNG_pg.scaffold_5000147
Naegleria gruberi
fgeneshNG_pg.scaffold_5000147
I
0.618
Lus10026432.g
Linum usitatissimum
Lus10026432.g
N
0.690
TC013909
Tribolium castaneum
TC013909
I
0.604