CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh3_pm.C_70282
(
Neurospora discreta
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
estExt_fgenesh3_pm.C_70282
T227403_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03266
M02224_2.00
Neurospora crassa
NNBWWAKDRN
NYHMTWWVNN
PBM
Weirauch et al.(2014)
pTH8814
0.867
1.000
FGRRES_01100
M02131_2.00
Fusarium graminearum
WTTAATTR
YAATTAAW
PBM
Weirauch et al.(2014)
pTH5438
0.796
0.825
ATEG_04171
M02059_2.00
Aspergillus terreus
BWWATKRNNN
NNNYMATWWV
PBM
Weirauch et al.(2014)
pTH5871
0.610
0.772
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh3_pm.C_70282
Homeodomain
69
125
KGKRKRTTAKDKAILEAAYNANPKPDKAARQDIVNRVSLNEKEVQIWFQNRRQNDRR
Links
Other
Homeodomain
family TFs
Other
Neurospora discreta
TFs
98 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_06861
Capronia coronata
A1O1_06861
I
0.623
A1O3_10315
Capronia epimyces
A1O3_10315
I
0.623
A1O5_07631
Cladophialophora psammophila
A1O5_07631
I
0.635
A1O7_09958
Cladophialophora yegresii
A1O7_09958
I
0.625
A1O9_06349
Exophiala aquamarina
A1O9_06349
I
0.647
ACRE_069570
Acremonium chrysogenum
ACRE_069570
I
0.765
ARB_01788
Arthroderma benhamiae
ARB_01788
I
0.622
BAUCODRAFT_120297
Baudoinia compniacensis
BAUCODRAFT_120297
I
0.653
BBA_00148
Beauveria bassiana
BBA_00148
I
0.864
Bcin01g06200
Botrytis cinerea
Bcin01g06200
I
0.694
BGHDH14_bgh01184
Blumeria graminis
BGHDH14_bgh01184
I
0.706
ACLA_040020
Aspergillus clavatus
CADACLAG00003199
I
0.610
CADAFLAG00002414
Aspergillus flavus
CADAFLAG00002414
I
0.610
CADANGAG00002342
Aspergillus niger
CADANGAG00002342
I
0.610
CADAORAG00001369
Aspergillus oryzae
CADAORAG00001369
I
0.610
ATEG_04171
Aspergillus terreus
CADATEAG00009984
D
0.610
CCM_06184
Cordyceps militaris
CCM_06184
I
0.860
CFIO01_01433
Colletotrichum fioriniae
CFIO01_01433
I
0.864
CGGC5_5664
Colletotrichum gloeosporioides
CGGC5_5664
I
0.864
CH063_05074
Colletotrichum higginsianum
CH063_05074
I
0.860
Cob_03876
Colletotrichum orbiculare
Cob_03876
I
0.860
CPUR_03335
Claviceps purpurea
CPUR_03335
I
0.860
CSUB01_02498
Colletotrichum sublineola
CSUB01_02498
I
0.864
CTHT_0056810
Chaetomium thermophilum
CTHT_0056810
I
0.816
estExt_fgenesh1_kg.C_chr_160021
Mycosphaerella graminicola
estExt_fgenesh1_kg.C_chr_160021
I
0.607
estExt_fgenesh1_pg.C_sca_1_chr1_3_00273
Nectria haematococca
estExt_fgenesh1_pg.C_sca_1_chr1_3_00273
I
0.860
EURHEDRAFT_516147
Aspergillus ruber
EURHEDRAFT_516147
I
0.610
F503_07224
Ophiostoma piceae uamh
F503_07224
I
0.852
FFUJ_01281
Fusarium fujikuroi
FFUJ_01281
I
0.860
fgenesh1_pm.00866_#_491
Aspergillus carbonarius
fgenesh1_pm.00866_#_491
I
0.610
fgenesh1_pm.C_scaffold_5000435
Cryphonectria parasitica
fgenesh1_pm.C_scaffold_5000435
I
0.867
FGRRES_01100
Fusarium graminearum
FGRRES_01100
D
0.796
FOXG_00297
Fusarium oxysporum
FOXG_00297
I
0.860
FPSE_09056
Fusarium pseudograminearum
FPSE_09056
I
0.860
FVEG_01221
Fusarium verticillioides
FVEG_01221
I
0.860
G647_08323
Cladophialophora carrionii
G647_08323
I
0.625
GGTG_12202
Gaeumannomyces graminis
GGTG_12202
I
0.856
GLRG_04370
Colletotrichum graminicola
GLRG_04370
I
0.864
H102_08770
Trichophyton rubrum
H102_08770
I
0.622
H105_08795
Trichophyton soudanense
H105_08795
I
0.622
HMPREF1120_01778
Exophiala dermatitidis
HMPREF1120_01778
I
0.623
HMPREF1541_02811
Cyphellophora europaea
HMPREF1541_02811
I
0.764
HMPREF1624_00506
Sporothrix schenckii
HMPREF1624_00506
I
0.864
MAC_05257
Metarhizium acridum
MAC_05257
I
0.860
MAJ_02218
Metarhizium majus
MAJ_02218
I
0.860
MAM_06825
Metarhizium album
MAM_06825
I
0.860
MANI_109748
Metarhizium anisopliae
MANI_109748
I
0.860
MAPG_09676
Magnaporthe poae
MAPG_09676
I
0.856
MBM_06173
Marssonina brunnea
MBM_06173
I
0.696
MBR_03692
Metarhizium brunneum
MBR_03692
I
0.860
MGG_11712
Magnaporthe oryzae
MGG_11712
I
0.803
MGU_04884
Metarhizium guizhouense
MGU_04884
I
0.860
Mycgr3G106635
Zymoseptoria tritici
Mycgr3G106635
I
0.607
MYCTH_2294145
Myceliophthora thermophila
MYCTH_2294145
I
0.620
NCU03266
Neurospora crassa
NCU03266
D
0.867
NechaG98757
Fusarium solani
NechaG98757
I
0.860
NEUTE1DRAFT_133183
Neurospora tetrasperma
NEUTE1DRAFT_133183
I
0.867
OCS_00016
Ophiocordyceps sinensis
OCS_00016
I
0.599
OIDMADRAFT_194382
Oidiodendron maius
OIDMADRAFT_194382
I
0.687
Pc18g00190
Penicillium chrysogenum
Pc18g00190
I
0.605
PCH_Pc18g00190
Penicillium rubens
PCH_Pc18g00190
I
0.605
PDE_04931
Penicillium oxalicum
PDE_04931
I
0.610
PDIP_75510
Penicillium digitatum
PDIP_75510
I
0.605
PEX1_077160
Penicillium expansum
PEX1_077160
I
0.610
PFICI_01897
Pestalotiopsis fici
PFICI_01897
I
0.858
PITC_036250
Penicillium italicum
PITC_036250
I
0.610
PODANS_1_2230
Podospora anserina
PODANS_1_2230
I
0.867
PV04_10601
Capronia semiimmersa
PV04_10601
I
0.637
PV05_02773
Exophiala xenobiotica
PV05_02773
I
0.741
PV06_07195
Exophiala oligosperma
PV06_07195
I
0.733
PV07_12240
Cladophialophora immunda
PV07_12240
I
0.773
PV08_06661
Exophiala spinifera
PV08_06661
I
0.733
PV10_01019
Exophiala mesophila
PV10_01019
I
0.753
PV11_06012
Exophiala sideris
PV11_06012
I
0.741
PVAR5_3236
Byssochlamys spectabilis
PVAR5_3236
I
0.608
S40285_01877
Stachybotrys chlorohalonata
S40285_01877
I
0.864
S40288_08800
Stachybotrys chartarum
S40288_08800
I
0.864
SAPIO_CDS3097
Scedosporium apiospermum
SAPIO_CDS3097
I
0.674
SBOR_0341
Sclerotinia borealis
SBOR_0341
I
0.694
SEPMUDRAFT_122411
Sphaerulina musiva
SEPMUDRAFT_122411
I
0.653
SMAC_02983
Sordaria macrospora
SMAC_02983
I
0.867
SPBR_06725
Sporothrix brasiliensis
SPBR_06725
I
0.864
SPPG_06166
Spizellomyces punctatus
SPPG_06166
I
0.622
SS1G_04522
Sclerotinia sclerotiorum
SS1G_04522
I
0.694
THITE_2131584
Thielavia terrestris
THITE_2131584
I
0.767
TRIREDRAFT_57059
Trichoderma reesei
TRIREDRAFT_57059
I
0.856
TRIVIDRAFT_42882
Trichoderma virens
TRIVIDRAFT_42882
I
0.856
TSTA_096850
Talaromyces stipitatus
TSTA_096850
I
0.610
U727_00433932271
Penicillium solitum
U727_00433932271
I
0.610
UV8b_5567
Ustilaginoidea virens
UV8b_5567
I
0.828
VDAG_03007
Verticillium dahliae
VDAG_03007
I
0.860
VDBG_05845
Verticillium alfalfae
VDBG_05845
I
0.860
VDBG_05845
Verticillium albo atrum
VDBG_05845
I
0.860
VHEMI06514
Torrubiella hemipterigena
VHEMI06514
I
0.853
X797_003774
Metarhizium robertsii
X797_003774
I
0.860
Z517_12283
Fonsecaea pedrosoi
Z517_12283
I
0.635
Z518_06261
Rhinocladiella mackenziei
Z518_06261
I
0.623
Z519_06193
Cladophialophora bantiana
Z519_06193
I
0.635