CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.16.233.1
(
Ostreococcus RCC809
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
gw1.16.233.1
T227614_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.16.233.1
Homeodomain
260
309
AWLWEHFYPTDERLKPIPTRAEKEALASQTGLTVTQVGDWFVNARARLWK
Links
Other
Homeodomain
family TFs
Other
Ostreococcus RCC809
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAG_12457
Allomyces macrogynus
AMAG_12457
N
0.611
AMAG_12459
Allomyces macrogynus
AMAG_12459
N
0.662
AMAG_14431
Allomyces macrogynus
AMAG_14431
N
0.611
EDP44665.1
Malassezia globosa
EDP44665.1
N
0.632
EuGene.0000160082
Micromonas pusilla
EuGene.0000160082
N
0.822
F775_19464
Aegilops tauschii
F775_19464
N
0.651
fgenesh1_pg.C_Chr_17.0001000037
Ostreococcus tauri
fgenesh1_pg.C_Chr_17.0001000037
N
0.827
gene29439-v1.0-hybrid
Fragaria vesca
gene29439-v1.0-hybrid
N
0.611
OSTLU_27999
Ostreococcus lucimarinus
OSTLU_27999
N
0.845
SCHCODRAFT_269858
Schizophyllum commune
SCHCODRAFT_269858
N
0.601
SCHCODRAFT_269864
Schizophyllum commune
SCHCODRAFT_269864
N
0.611
Traes_1AS_306BB8CFE
Triticum aestivum
Traes_1AS_306BB8CFE
N
0.651
Traes_1BS_C5E6FB087
Triticum aestivum
Traes_1BS_C5E6FB087
N
0.651
Traes_1DS_91D14CD7B
Triticum aestivum
Traes_1DS_91D14CD7B
N
0.651