CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf009674m
(
Mimulus guttatus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
mgf009674m
T227706_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATHB-15
M00864_2.00
Arabidopsis thaliana
AATAATTACT
AGTAATTATT
PBM
Franco-Zorrilla et al.(2014)
ICU4
0.867
0.982
ATHB-15
M06899_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
ATHB15_col_a
0.867
0.982
ATHB-9
M06898_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
PHV_col_a
0.861
0.929
ATHB-9
M02682_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND
SELEX
Mathelier et al.(2014)
MA0573.1
0.861
0.929
ATHB-9
M10623_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND
Transfac
Matys et al.(2006)
P$ATHB9_01
0.861
0.929
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf009674m
Homeodomain
6
65
GKYVRYTPEQVEALERLYHDCPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ
Links
Other
Homeodomain
family TFs
Other
Mimulus guttatus
TFs
335 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000015039
Ailuropoda melanoleuca
ENSAMEG00000015039
N
ENSBTAG00000023675
Bos taurus
ENSBTAG00000023675
N
ENSCAFG00000024833
Canis familiaris
ENSCAFG00000024833
N
ENSCHOG00000006889
Choloepus hoffmanni
ENSCHOG00000006889
N
ENSCJAG00000008799
Callithrix jacchus
ENSCJAG00000008799
N
ENSCPOG00000013512
Cavia porcellus
ENSCPOG00000013512
N
ENSCSAG00000005929
Chlorocebus sabaeus
ENSCSAG00000005929
N
ENSDNOG00000041508
Dasypus novemcinctus
ENSDNOG00000041508
N
Zfp654
Dipodomys ordii
ENSDORG00000010609
N
ENSECAG00000005293
Equus caballus
ENSECAG00000005293
N
ENSFCAG00000029279
Felis catus
ENSFCAG00000029279
N
ZNF654
Homo sapiens
ENSG00000175105
N
ZNF654
Gorilla gorilla
ENSGGOG00000000500
N
ENSMLUG00000027029
Myotis lucifugus
ENSMLUG00000027029
N
Zfp654
Mus musculus
ENSMUSG00000047141
N
ENSOARG00000017077
Ovis aries
ENSOARG00000017077
N
ENSP00000312141
Macaca fascicularis
ENSP00000312141
N
ENSP00000312141-D1
Bos grunniens
ENSP00000312141-D1
N
ENSPANG00000017486
Papio anubis
ENSPANG00000017486
N
ENSPPYG00000013643
Pongo abelii
ENSPPYG00000013643
N
ENSPTRG00000030181
Pan troglodytes
ENSPTRG00000030181
N
Zfp654
Rattus norvegicus
ENSRNOG00000029956
N
ENSSTOG00000024555
Ictidomys tridecemlineatus
ENSSTOG00000024555
N
ENSVPAG00000002882
Vicugna pacos
ENSVPAG00000002882
N
Myotis_brandtii_ZNF654_10027122
Myotis brandtii
Myotis_brandtii_ZNF654_10027122
N