Eucgr.I02464 (Eucalyptus grandis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Eucgr.I02464 T228499_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HOX6
M02157_2.00 		Oryza sativa
DTGATTRVNN
NNBYAATCAH		 PBM
Weirauch et al.(2014)
pTH6378 		0.673 0.589
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.I02464.1 Homeodomain 54 109

Links

Other Homeodomain family TFs
Other Eucalyptus grandis TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.1511s0010 Capsella grandiflora Cagra.1511s0010 N 0.629
Cucsa.339580 Cucumis sativus Cucsa.339580 I 0.626
F775_30991 Aegilops tauschii F775_30991 I 0.673
GSMUA_Achr1G16280_001 Musa acuminata GSMUA_Achr1G16280_001 I 0.664
GSMUA_Achr7G25990_001 Musa acuminata GSMUA_Achr7G25990_001 N 0.608
LPERR09G05860 Leersia perrieri LPERR09G05860 I 0.702
LPERR09G13180 Leersia perrieri LPERR09G13180 I 0.673
MLOC_69710 Hordeum vulgare MLOC_69710 I 0.673
OB09G23870 Oryza brachyantha OB09G23870 I 0.673
OMERI09G12780 Oryza meridionalis OMERI09G12780 I 0.673
OPUNC09G15600 Oryza punctata OPUNC09G15600 I 0.673
HOX6 Oryza sativa OS09G0528200 D 0.673
PGSC0003DMG400017775 Solanum tuberosum PGSC0003DMG400017775 I 0.668
PGSC0003DMG400017776 Solanum tuberosum PGSC0003DMG400017776 I 0.670
PGSC0003DMG400017787 Solanum tuberosum PGSC0003DMG400017787 I 0.670
SapurV1A.0617s0090 Salix purpurea SapurV1A.0617s0090 I 0.639
SapurV1A.2485s0010 Salix purpurea SapurV1A.2485s0010 I 0.639
Solyc03g034110.2 Solanum lycopersicum Solyc03g034110.2 I 0.670
Solyc03g034120.2 Solanum lycopersicum Solyc03g034120.2 I 0.627
Solyc03g034130.2 Solanum lycopersicum Solyc03g034130.2 I 0.663
Traes_5BL_9C32B27E2 Triticum aestivum Traes_5BL_9C32B27E2 I 0.673
Traes_5DL_96F9EED93 Triticum aestivum Traes_5DL_96F9EED93 I 0.673
TRIUR3_11780 Triticum urartu TRIUR3_11780 I 0.673